HHsearch alignment for GI: 254780982 and conserved domain: TIGR00948
>TIGR00948 2a75 L-lysine exporter; InterPro: IPR004777 L-lysine exporter, LysE is an exporter, which: (i) structurally represents a new type of translocator; (ii) demonstrates that exporters are also present for primary metabolites such as amino acids; and (iii) serves in one physiological function to link import with export activity .; GO: 0016021 integral to membrane.
Probab=99.96 E-value=9.4e-28 Score=155.83 Aligned_cols=174 Identities=13% Similarity=0.182 Sum_probs=147.8
Q ss_pred HHCCCHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHH-CCHHHHHHHHHHHHHHHHHHHHHHHHCCC
Q ss_conf 94899479999999983102-88999999999776699999999777553-07478886768999999999999741246
Q gi|254780982|r 17 TSAPGPGNILTINHALQHGW-RPNKILILGQETAVFIIMLSITMGTKFLS-QLAYTMLIIKFLGVAWLIYSAWSAWYSPF 94 (202)
Q Consensus 17 ~~~PGP~~~~~i~~~~~~G~-~~~~~~~~G~~~g~~~~~~~~~~g~~~l~-~~~~~~~~l~~~G~~yL~~lg~~~~~~~~ 94 (202)
T Consensus 2 i~~iG~QN~Fv~~qGi~R~~iWr~l~~~~lC~~cD~~Li~~Gv~G~~~l~~~~P~~~~~~~~GG~lFL~~yg~~a~~~a~ 81 (213)
T TIGR00948 2 ILPIGAQNAFVLRQGIRREYIWRVLLIVALCLICDLVLIAAGVFGVSALLAASPILLAVLTWGGVLFLLWYGLLALKTAW 81 (213)
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 35610346999872232325899999999999998999999999899999744689999999889999999999998730
Q ss_pred CC-----------CC--CCCC----------------------CCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCC
Q ss_conf 77-----------87--1013----------------------5678889999878986327425788786667652477
Q gi|254780982|r 95 ND-----------LP--LGEI----------------------PLSSKSKLFVKGFITDITNGKAWAFFMAMVPAYLNMN 139 (202)
Q Consensus 95 ~~-----------~~--~~~~----------------------~~~~~~~~f~~G~~v~l~NPka~~f~~~~~~~fi~~~ 139 (202)
T Consensus 82 ~~kveaPqiiee~~~~~~~~~PlGGsavatdtrnrvrvevsvd~~~~~~k~~~~~l~vTlLNPhvYLDt~~liG~~~~-- 159 (213)
T TIGR00948 82 RGKVEAPQIIEEPKALVPDEPPLGGSAVATDTRNRVRVEVSVDKKLGLKKVLAMTLAVTLLNPHVYLDTVVLIGALGL-- 159 (213)
T ss_pred CCCCCCCHHHHHHHHHCCCCCCCCCCHHHHCCCCEEEEEEEECCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHH--
T ss_conf 144555213220033145677776401110132214677740663028999999999983367899999999976554--
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHCCHHHHHHHHHHHHHH
Q ss_conf 33399999999999999999999999999999-999605138999999999999
Q gi|254780982|r 140 HYILPQSLILSLTMVSVDAMVLMTFSLICSKL-RTLFSSSKFVKIQNRVSAVVF 192 (202)
Q Consensus 140 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~in~i~g~~l 192 (202)
T Consensus 160 q~~~~~r~~F~AGa~~AS~~WF~~La~~a~~lG~~~l~~~~~~~~~n~~va~vM 213 (213)
T TIGR00948 160 QFSDEERWLFAAGAIAASLVWFASLAFGAARLGSPLLASPKVWRIINLVVAVVM 213 (213)
T ss_pred HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCC
T ss_conf 310024789999999999999999999999854400244779999989986359