RPS-BLAST 2.2.22 [Sep-27-2009] Database: CddB 21,608 sequences; 5,994,473 total letters Searching..................................................done Query= gi|254780983|ref|YP_003065396.1| hypothetical protein CLIBASIA_04420 [Candidatus Liberibacter asiaticus str. psy62] (55 letters) >gnl|CDD|148193 pfam06439, DUF1080, Domain of Unknown Function (DUF1080). Length = 176 Score = 25.3 bits (56), Expect = 3.9 Identities = 7/18 (38%), Positives = 10/18 (55%) Query: 32 SFKNYQARLEFSIPKDSN 49 F +++ LEF IP N Sbjct: 44 KFGDFELHLEFKIPPGGN 61 Database: CddB Posted date: Feb 4, 2011 9:54 PM Number of letters in database: 5,994,473 Number of sequences in database: 21,608 Lambda K H 0.329 0.140 0.420 Gapped Lambda K H 0.267 0.0629 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 21608 Number of Hits to DB: 848,304 Number of extensions: 35127 Number of successful extensions: 88 Number of sequences better than 10.0: 1 Number of HSP's gapped: 88 Number of HSP's successfully gapped: 8 Length of query: 55 Length of database: 5,994,473 Length adjustment: 27 Effective length of query: 28 Effective length of database: 5,411,057 Effective search space: 151509596 Effective search space used: 151509596 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 40 (21.8 bits) S2: 50 (23.3 bits)