RPS-BLAST 2.2.22 [Sep-27-2009] Database: mmdb70 33,805 sequences; 4,956,049 total letters Searching..................................................done Query= gi|254780986|ref|YP_003065399.1| hypothetical protein CLIBASIA_04435 [Candidatus Liberibacter asiaticus str. psy62] (94 letters) >2ox0_A JMJC domain-containing histone demethylation protein 3A; double-stranded beta helix, demethylase, oxygenase, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: MLY ALY OGA; 1.95A {Homo sapiens} PDB: 2oq7_A* 2os2_A* 2ot7_A* 2oq6_A* 2vd7_A* 2p5b_A* 2q8c_A* 2q8d_A* 2q8e_A* 2gp5_A* 2gp3_A* 2pxj_A* (A:) Length = 381 Score = 25.3 bits (53), Expect = 3.2 Identities = 10/64 (15%), Positives = 18/64 (28%) Query: 8 GWMAGIGCLGISIALVYLYIHQHFKKRTKQKKVDIAFKKKGSMKKDPTLLLLQGIHDALW 67 G + A + + + + KQ + K + D + Q LW Sbjct: 295 YGYHAGFNHGFNCAESTNFATRRWIEYGKQAVLCSCRKDMVKISMDVFVRKFQPERYKLW 354 Query: 68 DIAK 71 K Sbjct: 355 KAGK 358 Database: mmdb70 Posted date: Jun 20, 2010 3:12 AM Number of letters in database: 4,956,049 Number of sequences in database: 33,805 Lambda K H 0.328 0.142 0.451 Gapped Lambda K H 0.267 0.0617 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 33805 Number of Hits to DB: 719,865 Number of extensions: 25923 Number of successful extensions: 65 Number of sequences better than 10.0: 1 Number of HSP's gapped: 64 Number of HSP's successfully gapped: 3 Length of query: 94 Length of database: 4,956,049 Length adjustment: 54 Effective length of query: 40 Effective length of database: 3,130,579 Effective search space: 125223160 Effective search space used: 125223160 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 40 (21.8 bits) S2: 50 (23.3 bits)