RPS-BLAST 2.2.22 [Sep-27-2009]

Database: scop70_1_75 
           13,730 sequences; 2,407,596 total letters

Searching..................................................done

Query= gi|254780986|ref|YP_003065399.1| hypothetical protein
CLIBASIA_04435 [Candidatus Liberibacter asiaticus str. psy62]
         (94 letters)



>d1es9a_ c.23.10.3 (A:) Platelet-activating factor acetylhydrolase
          {Cow (Bos taurus), alpha1 [TaxId: 9913]}
          Length = 212

 Score = 22.6 bits (47), Expect = 8.6
 Identities = 5/21 (23%), Positives = 12/21 (57%)

Query: 24 YLYIHQHFKKRTKQKKVDIAF 44
          ++ +H  F   +K K+ ++ F
Sbjct: 19 WMSLHHRFVADSKDKEPEVVF 39


  Database: scop70_1_75
    Posted date:  Mar 27, 2010  6:21 PM
  Number of letters in database: 2,407,596
  Number of sequences in database:  13,730
  
Lambda     K      H
   0.328    0.142    0.451 

Gapped
Lambda     K      H
   0.267   0.0592    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 354,707
Number of extensions: 13385
Number of successful extensions: 46
Number of sequences better than 10.0: 1
Number of HSP's gapped: 46
Number of HSP's successfully gapped: 2
Length of query: 94
Length of database: 2,407,596
Length adjustment: 57
Effective length of query: 37
Effective length of database: 1,624,986
Effective search space: 60124482
Effective search space used: 60124482
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.8 bits)
S2: 47 (22.2 bits)