RPS-BLAST 2.2.22 [Sep-27-2009] Database: scop70_1_75 13,730 sequences; 2,407,596 total letters Searching..................................................done Query= gi|254780986|ref|YP_003065399.1| hypothetical protein CLIBASIA_04435 [Candidatus Liberibacter asiaticus str. psy62] (94 letters) >d1es9a_ c.23.10.3 (A:) Platelet-activating factor acetylhydrolase {Cow (Bos taurus), alpha1 [TaxId: 9913]} Length = 212 Score = 22.6 bits (47), Expect = 8.6 Identities = 5/21 (23%), Positives = 12/21 (57%) Query: 24 YLYIHQHFKKRTKQKKVDIAF 44 ++ +H F +K K+ ++ F Sbjct: 19 WMSLHHRFVADSKDKEPEVVF 39 Database: scop70_1_75 Posted date: Mar 27, 2010 6:21 PM Number of letters in database: 2,407,596 Number of sequences in database: 13,730 Lambda K H 0.328 0.142 0.451 Gapped Lambda K H 0.267 0.0592 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 13730 Number of Hits to DB: 354,707 Number of extensions: 13385 Number of successful extensions: 46 Number of sequences better than 10.0: 1 Number of HSP's gapped: 46 Number of HSP's successfully gapped: 2 Length of query: 94 Length of database: 2,407,596 Length adjustment: 57 Effective length of query: 37 Effective length of database: 1,624,986 Effective search space: 60124482 Effective search space used: 60124482 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 40 (21.8 bits) S2: 47 (22.2 bits)