HHsearch alignment of GI: 254780987 and MMDB domain: 3cta_A_1-91
>3cta_A (A:1-91) Riboflavin kinase; structural genomics, transferase, PSI-2, protein structure initiative; 2.20A {Thermoplasma acidophilum dsm 1728}
Probab=91.05 E-value=0.17 Score=28.93 Aligned_cols=74 Identities=16% Similarity=0.118 Sum_probs=54.7
Q ss_pred HHCCCHHHHHCCCCCCCCCCCCHHHHHHHHCCCCCHHHHHH---HHHHCCCCHHHCCCCCCCEEECHHHHHHHHHHHHC
Q ss_conf 01223366515888765765189999998777889899999---99987981220257753201161135644564201
Q gi|254780987|r 4 VLGVNVLQDINLPTPNNLPYYTPTQLGKKLATKPSAIKVNK---KLREWGFLLEEHESGRKRDVLTPKGAKGGGRYFDT 79 (110)
Q Consensus 4 ~~~~~~~~~~~LP~~~~~~~ltPTqlGk~lg~k~SA~~vN~---lL~~~GlQ~~~~~~grkew~lT~~G~k~g~~~~dt 79 (110)
-.|.+..|..-|-+=.+.+..+.++|.+.++ ++--.|.+ .|.+.||-......-++.+.+|++|++....+.+.
T Consensus 8 ~~~l~~~~~~iL~~i~~~~~~t~~ela~~l~--i~~~~vs~~i~~L~~~gli~r~~D~R~~~i~lT~~G~~~~~~~~~~ 84 (91)
T 3cta_A 8 QYYRAIKKIKEAAEASNRAYLTSSKLADMLG--ISQQSASRIIIDLEKNGYITRTVTKRGQILNITEKGLDVLYTEFAD 84 (91)
T ss_dssp HHHHHHHHHHHHTTTSSEEECCHHHHHHHHT--SCHHHHHHHHHHHHHTTSEEEEEETTEEEEEECHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHCCCCCCCHHHHHHHHC--CCHHHHHHHHHHHHHCCCEEEEECCCEEEEEECHHHHHHHHHHHHH
T ss_conf 9999999999856404799838999999988--7887999999999988998997349833344898899999999999