BLASTP 2.2.22 [Sep-27-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.


Reference for composition-based statistics starting in round 2:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,  
Eugene V. Koonin, and Stephen F. Altschul (2001), 
"Improving the accuracy of PSI-BLAST protein database searches with 
composition-based statistics and other refinements",  Nucleic Acids Res. 29:2994-3005.

Query= gi|254780988|ref|YP_003065401.1| hypothetical protein
CLIBASIA_04445 [Candidatus Liberibacter asiaticus str. psy62]
         (151 letters)

Database: nr 
           14,124,377 sequences; 4,842,793,630 total letters

Searching..................................................done


Results from round 1


>gi|254780988|ref|YP_003065401.1| hypothetical protein CLIBASIA_04445 [Candidatus Liberibacter
           asiaticus str. psy62]
 gi|254040665|gb|ACT57461.1| hypothetical protein CLIBASIA_04445 [Candidatus Liberibacter
           asiaticus str. psy62]
          Length = 151

 Score =  307 bits (786), Expect = 4e-82,   Method: Compositional matrix adjust.
 Identities = 151/151 (100%), Positives = 151/151 (100%)

Query: 1   MISFLTGSIARFFIKFVPSLFNLLEEYIMKEKSIEHDRLRLEIAKIQSTTQVDLKALESE 60
           MISFLTGSIARFFIKFVPSLFNLLEEYIMKEKSIEHDRLRLEIAKIQSTTQVDLKALESE
Sbjct: 1   MISFLTGSIARFFIKFVPSLFNLLEEYIMKEKSIEHDRLRLEIAKIQSTTQVDLKALESE 60

Query: 61  TPVRLARLQNQANEDQFERESKAMIFFNALIRPFTTLFWIILYPLLIWWGVEKGYLTKDP 120
           TPVRLARLQNQANEDQFERESKAMIFFNALIRPFTTLFWIILYPLLIWWGVEKGYLTKDP
Sbjct: 61  TPVRLARLQNQANEDQFERESKAMIFFNALIRPFTTLFWIILYPLLIWWGVEKGYLTKDP 120

Query: 121 LTLLAPFTQDIIACILGFWFTDTIVQRRKGV 151
           LTLLAPFTQDIIACILGFWFTDTIVQRRKGV
Sbjct: 121 LTLLAPFTQDIIACILGFWFTDTIVQRRKGV 151


>gi|254781199|ref|YP_003065612.1| hypothetical protein CLIBASIA_05530 [Candidatus Liberibacter
           asiaticus str. psy62]
 gi|254040876|gb|ACT57672.1| hypothetical protein CLIBASIA_05530 [Candidatus Liberibacter
           asiaticus str. psy62]
 gi|317120664|gb|ADV02487.1| hypothetical protein SC1_gp005 [Liberibacter phage SC1]
 gi|317120808|gb|ADV02629.1| hypothetical protein SC1_gp005 [Candidatus Liberibacter asiaticus]
          Length = 157

 Score =  160 bits (406), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 79/158 (50%), Positives = 114/158 (72%), Gaps = 15/158 (9%)

Query: 3   SFLTGSIARFFIKFVPSLF----NLLEEYIMKEKSIEHDRLRLEIAKIQSTTQVDLKALE 58
           SFL G + RF ++F+PS F    +++ EY+ K++SIE+D+L+LE+AK  S+TQ+DL  ++
Sbjct: 4   SFLAGGLFRFLLRFIPSGFERIVDVVSEYLTKKQSIEYDKLKLEMAKNDSSTQLDLAEIK 63

Query: 59  S-------ETPVRLARLQNQANEDQFERESKAMIFFNALIRPFTTLFWIILYPLLIWWGV 111
           +       + P+RLAR++ Q    + +   K +  F ALIRP TT FWII+YPLL+WW V
Sbjct: 64  AGIEELKIDKPIRLARIEAQ----KVKSGVKWVDGFTALIRPLTTFFWIIVYPLLVWWSV 119

Query: 112 EKGYLTKDPLTLLAPFTQDIIACILGFWFTDTIVQRRK 149
           ++G    DPLTLL+PFTQ+IIACILGFW+TD IVQ++K
Sbjct: 120 KEGMFNSDPLTLLSPFTQEIIACILGFWYTDKIVQKKK 157


>gi|317120705|gb|ADV02527.1| hypothetical protein SC2_gp005 [Liberibacter phage SC2]
 gi|317120766|gb|ADV02587.1| hypothetical protein SC2_gp005 [Candidatus Liberibacter asiaticus]
          Length = 158

 Score =  159 bits (402), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 77/159 (48%), Positives = 119/159 (74%), Gaps = 15/159 (9%)

Query: 3   SFLTGSIARFFIKFVPSLF----NLLEEYIMKEKSIEHDRLRLEIAKIQSTTQVDLKA-- 56
           SFL G + RF ++F+PS F    +++ EY+ K++S+E++++++E+AKI ++TQV+L+   
Sbjct: 4   SFLAGGLFRFLLRFIPSSFERIVDVVSEYLTKKQSLEYNKMQIELAKINTSTQVNLEEIK 63

Query: 57  -----LESETPVRLARLQNQANEDQFERESKAMIFFNALIRPFTTLFWIILYPLLIWWGV 111
                L+++ P+RLAR+++Q      + + K +  FNALIRP TTLFWI++YPLL+WW V
Sbjct: 64  YGIEELKADKPIRLARVKSQ----NVKIDIKWINGFNALIRPLTTLFWIVVYPLLVWWSV 119

Query: 112 EKGYLTKDPLTLLAPFTQDIIACILGFWFTDTIVQRRKG 150
           ++   + DPLTLL+PFTQ+IIACILGFW+TD IVQ+R G
Sbjct: 120 KERMFSIDPLTLLSPFTQEIIACILGFWYTDKIVQKRWG 158


>gi|315121924|ref|YP_004062413.1| hypothetical protein CKC_00870 [Candidatus Liberibacter
           solanacearum CLso-ZC1]
 gi|313495326|gb|ADR51925.1| hypothetical protein CKC_00870 [Candidatus Liberibacter
           solanacearum CLso-ZC1]
          Length = 158

 Score =  158 bits (399), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 80/159 (50%), Positives = 112/159 (70%), Gaps = 15/159 (9%)

Query: 3   SFLTGSIARFFIKFVPSLFNLLE----EYIMKEKSIEHDRLRLEIAKIQSTTQVDL---- 54
           SFL G I RF ++FVPS+F  +     EY+M+++SIE+D+++LE  KI S+TQ+DL    
Sbjct: 4   SFLAGGIFRFALRFVPSVFEKIADGVLEYLMQKQSIEYDKMKLEQTKINSSTQLDLAEIK 63

Query: 55  ---KALESETPVRLARLQNQANEDQFERESKAMIFFNALIRPFTTLFWIILYPLLIWWGV 111
              + L+ + P+RLAR++ Q    + +   K +   NALIRP TTLFWII+YPLL+WW V
Sbjct: 64  YGIEELKVDKPIRLARIKAQ----KVKSGIKWIDGVNALIRPLTTLFWIIVYPLLVWWSV 119

Query: 112 EKGYLTKDPLTLLAPFTQDIIACILGFWFTDTIVQRRKG 150
           ++GY  K PL +L  F Q+IIACILGFW+TD IVQ+R+G
Sbjct: 120 KEGYFDKSPLAVLTLFEQEIIACILGFWYTDKIVQKRRG 158


>gi|315122886|ref|YP_004063375.1| hypothetical protein CKC_05710 [Candidatus Liberibacter
           solanacearum CLso-ZC1]
 gi|313496288|gb|ADR52887.1| hypothetical protein CKC_05710 [Candidatus Liberibacter
           solanacearum CLso-ZC1]
          Length = 158

 Score =  154 bits (389), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 75/159 (47%), Positives = 113/159 (71%), Gaps = 15/159 (9%)

Query: 3   SFLTGSIARFFIKFVPSLFNLLE----EYIMKEKSIEHDRLRLEIAKIQSTTQVDL---- 54
           SFL G + RF ++FVPS+F  +     EY+M+++SIE+D+++LE  +I S+TQ+DL    
Sbjct: 4   SFLAGGLFRFALRFVPSVFEKIADGVLEYLMQKQSIEYDKMKLEQTRINSSTQLDLADIK 63

Query: 55  ---KALESETPVRLARLQNQANEDQFERESKAMIFFNALIRPFTTLFWIILYPLLIWWGV 111
              + L+ + P+RLAR++ Q    + +   K +   N LIRP TTLFWII+YPLL+WW V
Sbjct: 64  YAIEELKVDQPIRLARIKAQ----KVKSGVKWIDGLNTLIRPLTTLFWIIVYPLLVWWSV 119

Query: 112 EKGYLTKDPLTLLAPFTQDIIACILGFWFTDTIVQRRKG 150
           ++G   + PL++L+PF Q+IIACILGFW+TD IVQ+++G
Sbjct: 120 KEGIFDRSPLSILSPFEQEIIACILGFWYTDKIVQKKRG 158


>gi|317120748|gb|ADV02570.1| hypothetical protein SC2_gp250 [Liberibacter phage SC2]
 gi|317120762|gb|ADV02583.1| hypothetical protein SC2_gp250 [Candidatus Liberibacter asiaticus]
          Length = 157

 Score =  154 bits (389), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 74/158 (46%), Positives = 112/158 (70%), Gaps = 15/158 (9%)

Query: 3   SFLTGSIARFFIKFVPSLF----NLLEEYIMKEKSIEHDRLRLEIAKIQSTTQVDL---- 54
           SFL G + RF ++F+PS F    +++ EY+ K++SIE+D+ +LE AKI S+ Q+DL    
Sbjct: 4   SFLAGGLFRFLLRFIPSSFERIVDVVSEYLTKKQSIEYDKWKLETAKIDSSLQLDLADIK 63

Query: 55  ---KALESETPVRLARLQNQANEDQFERESKAMIFFNALIRPFTTLFWIILYPLLIWWGV 111
              + L+++ P++LAR++ Q      +   K +  FN L+RP TTLFWII+YP+++WW V
Sbjct: 64  YGIEELKADKPIKLARIKAQ----NIKSGVKWIDSFNTLVRPLTTLFWIIVYPMMVWWSV 119

Query: 112 EKGYLTKDPLTLLAPFTQDIIACILGFWFTDTIVQRRK 149
           ++G   K PL++L+PF Q+IIACILGFWFTD IVQ+R+
Sbjct: 120 KEGIFDKSPLSILSPFEQEIIACILGFWFTDKIVQKRR 157


>gi|315122566|ref|YP_004063055.1| hypothetical protein CKC_04090 [Candidatus Liberibacter
           solanacearum CLso-ZC1]
 gi|313495968|gb|ADR52567.1| hypothetical protein CKC_04090 [Candidatus Liberibacter
           solanacearum CLso-ZC1]
          Length = 130

 Score =  126 bits (316), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 62/131 (47%), Positives = 93/131 (70%), Gaps = 10/131 (7%)

Query: 29  MKEKSIEHDRLRLEIAKIQSTTQVDL-------KALESETPVRLARLQNQANEDQFERES 81
           M+++SIE+++++LE  +IQS+TQ+DL       + L+ + P+RLAR++ Q  +   +   
Sbjct: 1   MQKRSIEYEKMKLEQTRIQSSTQLDLADIKLGIEELKVDQPIRLARIKAQQVKSGIQWID 60

Query: 82  KAMIFFNALIRPFTTLFWIILYPLLIWW--GVEKGYLTKDPLTLLAPFTQDIIACILGFW 139
                 NALIRP TTLFWII +PLL+WW  GV++G   + PL++L+PF QDIIACILGFW
Sbjct: 61  AFNALINALIRPLTTLFWII-FPLLVWWSMGVKEGIFDRSPLSILSPFEQDIIACILGFW 119

Query: 140 FTDTIVQRRKG 150
           +TD IVQ+++ 
Sbjct: 120 YTDKIVQKKRS 130


>gi|315122344|ref|YP_004062833.1| hypothetical protein CKC_02980 [Candidatus Liberibacter
           solanacearum CLso-ZC1]
 gi|313495746|gb|ADR52345.1| hypothetical protein CKC_02980 [Candidatus Liberibacter
           solanacearum CLso-ZC1]
          Length = 125

 Score =  120 bits (300), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 62/131 (47%), Positives = 93/131 (70%), Gaps = 15/131 (11%)

Query: 29  MKEKSIEHDRLRLEIAKIQSTTQVDL-------KALESETPVRLARLQNQANEDQFERES 81
           M+++SIE+D+ +LE+A+   +TQ+DL       + L+ + P+RLAR++ Q    +F+   
Sbjct: 1   MQKQSIEYDKTKLELAR--GSTQLDLADIKYAIEELKVDQPIRLARIKAQ----KFKSGI 54

Query: 82  KAMIFFNALIRPFTTLFWIILYPLLIWW--GVEKGYLTKDPLTLLAPFTQDIIACILGFW 139
           K +  FNALIRP TT FWII+YPLL+W    V++G   + PL++L+PF QDIIACILGFW
Sbjct: 55  KWIDGFNALIRPLTTFFWIIIYPLLVWGIVCVKEGVFDRSPLSILSPFEQDIIACILGFW 114

Query: 140 FTDTIVQRRKG 150
           +TD IVQ+++ 
Sbjct: 115 YTDKIVQKKRS 125


>gi|315122770|ref|YP_004063259.1| hypothetical protein CKC_05125 [Candidatus Liberibacter
           solanacearum CLso-ZC1]
 gi|313496172|gb|ADR52771.1| hypothetical protein CKC_05125 [Candidatus Liberibacter
           solanacearum CLso-ZC1]
          Length = 124

 Score =  104 bits (260), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 52/125 (41%), Positives = 85/125 (68%), Gaps = 15/125 (12%)

Query: 3   SFLTGSIARFFIKFVPSLFNLLE----EYIMKEKSIEHDRLRLEIAKIQSTTQVDL---- 54
           SFL G + RF ++F+PS+F  +     EY+M+++SIE+D+++LE+A+I S+TQ+DL    
Sbjct: 4   SFLVGEVFRFALRFIPSVFEKIADGVLEYLMQKQSIEYDKMKLELARINSSTQLDLADIK 63

Query: 55  ---KALESETPVRLARLQNQANEDQFERESKAMIFFNALIRPFTTLFWIILYPLLIWWGV 111
              + L+++  +RLAR++ Q  +   +        FNA +RP T+LFWII+YPLL+WW V
Sbjct: 64  LEIEELKADQLIRLARIKAQKVKSGIQWIDG----FNAFVRPLTSLFWIIVYPLLVWWSV 119

Query: 112 EKGYL 116
           + G+L
Sbjct: 120 KGGHL 124


>gi|315122303|ref|YP_004062792.1| hypothetical protein CKC_02775 [Candidatus Liberibacter
           solanacearum CLso-ZC1]
 gi|313495705|gb|ADR52304.1| hypothetical protein CKC_02775 [Candidatus Liberibacter
           solanacearum CLso-ZC1]
          Length = 115

 Score = 66.2 bits (160), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 38/97 (39%), Positives = 62/97 (63%), Gaps = 13/97 (13%)

Query: 18  PSLFNLLE----EYIMKEKSIEHDRLRLEIAKIQSTTQVDL-------KALESETPVRLA 66
           PS+F  +     EY+M+++SIE+D++ LE+ +I S+TQ+DL       + L+ +  +RLA
Sbjct: 14  PSVFEKIADGVLEYLMQKQSIEYDKMNLELPRINSSTQLDLADIKYAIEELKVDQSIRLA 73

Query: 67  RLQNQANEDQFERESKAMIFFNALIRPFTTLFWIILY 103
           R++ Q  ++      K +  FNALIRP TT FWII++
Sbjct: 74  RIKAQKVKNG--SGVKWIDGFNALIRPLTTFFWIIIF 108


>gi|315122323|ref|YP_004062812.1| hypothetical protein CKC_02875 [Candidatus Liberibacter
           solanacearum CLso-ZC1]
 gi|313495725|gb|ADR52324.1| hypothetical protein CKC_02875 [Candidatus Liberibacter
           solanacearum CLso-ZC1]
          Length = 40

 Score = 57.8 bits (138), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 23/40 (57%), Positives = 32/40 (80%)

Query: 111 VEKGYLTKDPLTLLAPFTQDIIACILGFWFTDTIVQRRKG 150
           ++ G   + PL++L+PF QDIIACILGFW TD IVQ+++G
Sbjct: 1   MKGGIFDRSPLSILSPFEQDIIACILGFWCTDKIVQKKRG 40


>gi|315121790|ref|YP_004062279.1| hypothetical protein CKC_00200 [Candidatus Liberibacter
          solanacearum CLso-ZC1]
 gi|313495192|gb|ADR51791.1| hypothetical protein CKC_00200 [Candidatus Liberibacter
          solanacearum CLso-ZC1]
          Length = 121

 Score = 57.8 bits (138), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 30/82 (36%), Positives = 53/82 (64%), Gaps = 11/82 (13%)

Query: 1  MISFLTGSIARFFIKFVPSLFNLLE----EYIMKEKSIEHDRLRLEIAKIQSTTQVDL-- 54
          M SFL   + R  ++F+PS+F  +     EY+M+++SIE+D+ +LE+A+I  +TQ+DL  
Sbjct: 2  MESFLASGLFRLALRFIPSVFEKIADGVLEYLMQKQSIEYDKTKLELARINGSTQLDLAD 61

Query: 55 -----KALESETPVRLARLQNQ 71
               + L+ +  +RLAR++ Q
Sbjct: 62 IKYAIEELKVDQSIRLARIKAQ 83


>gi|315122634|ref|YP_004063123.1| hypothetical protein CKC_04430 [Candidatus Liberibacter
           solanacearum CLso-ZC1]
 gi|313496036|gb|ADR52635.1| hypothetical protein CKC_04430 [Candidatus Liberibacter
           solanacearum CLso-ZC1]
          Length = 228

 Score = 54.7 bits (130), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 38/110 (34%), Positives = 61/110 (55%), Gaps = 11/110 (10%)

Query: 14  IKFVPSLFNLLEEYIMKEKSIEHDRLRLEIAKIQSTTQVDL-------KALESETPVRLA 66
           I+  P  F  + E++M+++ IE+D+ +LE  +IQSTTQ+DL       + L+ + P+RLA
Sbjct: 123 IEMPPPKF--ISEHLMQKRFIEYDKTKLEQTRIQSTTQLDLADIKLGIEELKVDQPIRLA 180

Query: 67  RLQNQANEDQFERESKAMIFFNALIRPFTTLFWIILYPLLIWWGVEKGYL 116
           R++ Q  +       K +  FN+LIRP TT F             E+G+L
Sbjct: 181 RIKAQKVKSS--SGVKWIDGFNSLIRPLTTFFLDYYLSATRLVECERGHL 228


>gi|315122322|ref|YP_004062811.1| hypothetical protein CKC_02870 [Candidatus Liberibacter
           solanacearum CLso-ZC1]
 gi|313495724|gb|ADR52323.1| hypothetical protein CKC_02870 [Candidatus Liberibacter
           solanacearum CLso-ZC1]
          Length = 55

 Score = 42.4 bits (98), Expect = 0.024,   Method: Compositional matrix adjust.
 Identities = 21/52 (40%), Positives = 34/52 (65%), Gaps = 4/52 (7%)

Query: 52  VDLKALESETPVRLARLQNQANEDQFERESKAMIFFNALIRPFTTLFWIILY 103
           + ++ L+ + P+RLAR++ Q    + +   K +  FNALIRP TT FWII++
Sbjct: 1   MGIEELKVDQPIRLARIKAQ----KVKSGVKWIDGFNALIRPLTTFFWIIVF 48


>gi|315122321|ref|YP_004062810.1| hypothetical protein CKC_02865 [Candidatus Liberibacter
          solanacearum CLso-ZC1]
 gi|313495723|gb|ADR52322.1| hypothetical protein CKC_02865 [Candidatus Liberibacter
          solanacearum CLso-ZC1]
          Length = 45

 Score = 40.8 bits (94), Expect = 0.054,   Method: Compositional matrix adjust.
 Identities = 16/37 (43%), Positives = 30/37 (81%)

Query: 14 IKFVPSLFNLLEEYIMKEKSIEHDRLRLEIAKIQSTT 50
          ++F PS+F+ + EY+M+++SIE+D+++ E  +IQS T
Sbjct: 9  LRFFPSVFDGVLEYLMQKQSIEYDKMKPEQTRIQSAT 45


>gi|315122366|ref|YP_004062855.1| hypothetical protein CKC_03090 [Candidatus Liberibacter
           solanacearum CLso-ZC1]
 gi|313495768|gb|ADR52367.1| hypothetical protein CKC_03090 [Candidatus Liberibacter
           solanacearum CLso-ZC1]
          Length = 52

 Score = 36.6 bits (83), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 18/47 (38%), Positives = 28/47 (59%), Gaps = 4/47 (8%)

Query: 107 IWWGVEKGYLTKDPL-TLLAP---FTQDIIACILGFWFTDTIVQRRK 149
           IW G+E     +  + TLL     + QDII+ +LGFWF+D +V++  
Sbjct: 6   IWQGIESELFDQKTIATLLVTILEYGQDIISSVLGFWFSDGVVKKEN 52


>gi|331650027|ref|ZP_08351100.1| terminase small subunit (Gp1) [Escherichia coli M605]
 gi|331040972|gb|EGI13129.1| terminase small subunit (Gp1) [Escherichia coli M605]
          Length = 182

 Score = 34.3 bits (77), Expect = 5.4,   Method: Compositional matrix adjust.
 Identities = 22/65 (33%), Positives = 40/65 (61%), Gaps = 3/65 (4%)

Query: 23  LLEEYIMKEKSIEHDRLRLEIAKIQSTTQVDLK--ALESETPVRLARLQNQANEDQFERE 80
           ++E Y  +EK IE+++LR E+A +++ T+ DL+   ++ E   RL + Q  A E +  R+
Sbjct: 46  VIEWYAQREKDIENEKLRKEVADLRAATESDLQPGTIDYER-YRLTKAQADAQELKNARD 104

Query: 81  SKAMI 85
           S  +I
Sbjct: 105 SALVI 109


>gi|169333797|ref|ZP_02860990.1| hypothetical protein ANASTE_00182 [Anaerofustis stercorihominis
          DSM 17244]
 gi|169259362|gb|EDS73328.1| hypothetical protein ANASTE_00182 [Anaerofustis stercorihominis
          DSM 17244]
          Length = 710

 Score = 33.9 bits (76), Expect = 6.9,   Method: Composition-based stats.
 Identities = 20/83 (24%), Positives = 43/83 (51%), Gaps = 3/83 (3%)

Query: 1  MISFLTGSIARFFIK---FVPSLFNLLEEYIMKEKSIEHDRLRLEIAKIQSTTQVDLKAL 57
          +I++L     ++FI     V SL  L   Y + +KS+EH      ++ ++  T+ D+K +
Sbjct: 3  LINYLYNKFNKWFIYSTILVISLLILFSGYFLYKKSVEHAVYNTTVSFMEQITEHDIKNM 62

Query: 58 ESETPVRLARLQNQANEDQFERE 80
          E++   +   +Q+ A+  +  R+
Sbjct: 63 ENQMSAKYEYIQSLASRIRNTRK 85


Searching..................................................done


Results from round 2




>gi|315122886|ref|YP_004063375.1| hypothetical protein CKC_05710 [Candidatus Liberibacter
           solanacearum CLso-ZC1]
 gi|313496288|gb|ADR52887.1| hypothetical protein CKC_05710 [Candidatus Liberibacter
           solanacearum CLso-ZC1]
          Length = 158

 Score =  224 bits (572), Expect = 3e-57,   Method: Composition-based stats.
 Identities = 75/161 (46%), Positives = 114/161 (70%), Gaps = 15/161 (9%)

Query: 1   MISFLTGSIARFFIKFVPSLFNLLE----EYIMKEKSIEHDRLRLEIAKIQSTTQVDL-- 54
           + SFL G + RF ++FVPS+F  +     EY+M+++SIE+D+++LE  +I S+TQ+DL  
Sbjct: 2   IQSFLAGGLFRFALRFVPSVFEKIADGVLEYLMQKQSIEYDKMKLEQTRINSSTQLDLAD 61

Query: 55  -----KALESETPVRLARLQNQANEDQFERESKAMIFFNALIRPFTTLFWIILYPLLIWW 109
                + L+ + P+RLAR++ Q    + +   K +   N LIRP TTLFWII+YPLL+WW
Sbjct: 62  IKYAIEELKVDQPIRLARIKAQ----KVKSGVKWIDGLNTLIRPLTTLFWIIVYPLLVWW 117

Query: 110 GVEKGYLTKDPLTLLAPFTQDIIACILGFWFTDTIVQRRKG 150
            V++G   + PL++L+PF Q+IIACILGFW+TD IVQ+++G
Sbjct: 118 SVKEGIFDRSPLSILSPFEQEIIACILGFWYTDKIVQKKRG 158


>gi|315121924|ref|YP_004062413.1| hypothetical protein CKC_00870 [Candidatus Liberibacter
           solanacearum CLso-ZC1]
 gi|313495326|gb|ADR51925.1| hypothetical protein CKC_00870 [Candidatus Liberibacter
           solanacearum CLso-ZC1]
          Length = 158

 Score =  221 bits (563), Expect = 3e-56,   Method: Composition-based stats.
 Identities = 80/161 (49%), Positives = 112/161 (69%), Gaps = 15/161 (9%)

Query: 1   MISFLTGSIARFFIKFVPSLFNLLE----EYIMKEKSIEHDRLRLEIAKIQSTTQVDL-- 54
           + SFL G I RF ++FVPS+F  +     EY+M+++SIE+D+++LE  KI S+TQ+DL  
Sbjct: 2   IQSFLAGGIFRFALRFVPSVFEKIADGVLEYLMQKQSIEYDKMKLEQTKINSSTQLDLAE 61

Query: 55  -----KALESETPVRLARLQNQANEDQFERESKAMIFFNALIRPFTTLFWIILYPLLIWW 109
                + L+ + P+RLAR++ Q      +   K +   NALIRP TTLFWII+YPLL+WW
Sbjct: 62  IKYGIEELKVDKPIRLARIKAQK----VKSGIKWIDGVNALIRPLTTLFWIIVYPLLVWW 117

Query: 110 GVEKGYLTKDPLTLLAPFTQDIIACILGFWFTDTIVQRRKG 150
            V++GY  K PL +L  F Q+IIACILGFW+TD IVQ+R+G
Sbjct: 118 SVKEGYFDKSPLAVLTLFEQEIIACILGFWYTDKIVQKRRG 158


>gi|254780988|ref|YP_003065401.1| hypothetical protein CLIBASIA_04445 [Candidatus Liberibacter
           asiaticus str. psy62]
 gi|254040665|gb|ACT57461.1| hypothetical protein CLIBASIA_04445 [Candidatus Liberibacter
           asiaticus str. psy62]
          Length = 151

 Score =  219 bits (557), Expect = 1e-55,   Method: Composition-based stats.
 Identities = 151/151 (100%), Positives = 151/151 (100%)

Query: 1   MISFLTGSIARFFIKFVPSLFNLLEEYIMKEKSIEHDRLRLEIAKIQSTTQVDLKALESE 60
           MISFLTGSIARFFIKFVPSLFNLLEEYIMKEKSIEHDRLRLEIAKIQSTTQVDLKALESE
Sbjct: 1   MISFLTGSIARFFIKFVPSLFNLLEEYIMKEKSIEHDRLRLEIAKIQSTTQVDLKALESE 60

Query: 61  TPVRLARLQNQANEDQFERESKAMIFFNALIRPFTTLFWIILYPLLIWWGVEKGYLTKDP 120
           TPVRLARLQNQANEDQFERESKAMIFFNALIRPFTTLFWIILYPLLIWWGVEKGYLTKDP
Sbjct: 61  TPVRLARLQNQANEDQFERESKAMIFFNALIRPFTTLFWIILYPLLIWWGVEKGYLTKDP 120

Query: 121 LTLLAPFTQDIIACILGFWFTDTIVQRRKGV 151
           LTLLAPFTQDIIACILGFWFTDTIVQRRKGV
Sbjct: 121 LTLLAPFTQDIIACILGFWFTDTIVQRRKGV 151


>gi|254781199|ref|YP_003065612.1| hypothetical protein CLIBASIA_05530 [Candidatus Liberibacter
           asiaticus str. psy62]
 gi|254040876|gb|ACT57672.1| hypothetical protein CLIBASIA_05530 [Candidatus Liberibacter
           asiaticus str. psy62]
 gi|317120664|gb|ADV02487.1| hypothetical protein SC1_gp005 [Liberibacter phage SC1]
 gi|317120808|gb|ADV02629.1| hypothetical protein SC1_gp005 [Candidatus Liberibacter asiaticus]
          Length = 157

 Score =  215 bits (547), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 80/160 (50%), Positives = 115/160 (71%), Gaps = 15/160 (9%)

Query: 1   MISFLTGSIARFFIKFVPSLF----NLLEEYIMKEKSIEHDRLRLEIAKIQSTTQVDL-- 54
           + SFL G + RF ++F+PS F    +++ EY+ K++SIE+D+L+LE+AK  S+TQ+DL  
Sbjct: 2   IQSFLAGGLFRFLLRFIPSGFERIVDVVSEYLTKKQSIEYDKLKLEMAKNDSSTQLDLAE 61

Query: 55  -----KALESETPVRLARLQNQANEDQFERESKAMIFFNALIRPFTTLFWIILYPLLIWW 109
                + L+ + P+RLAR++ Q    + +   K +  F ALIRP TT FWII+YPLL+WW
Sbjct: 62  IKAGIEELKIDKPIRLARIEAQ----KVKSGVKWVDGFTALIRPLTTFFWIIVYPLLVWW 117

Query: 110 GVEKGYLTKDPLTLLAPFTQDIIACILGFWFTDTIVQRRK 149
            V++G    DPLTLL+PFTQ+IIACILGFW+TD IVQ++K
Sbjct: 118 SVKEGMFNSDPLTLLSPFTQEIIACILGFWYTDKIVQKKK 157


>gi|317120748|gb|ADV02570.1| hypothetical protein SC2_gp250 [Liberibacter phage SC2]
 gi|317120762|gb|ADV02583.1| hypothetical protein SC2_gp250 [Candidatus Liberibacter asiaticus]
          Length = 157

 Score =  212 bits (539), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 74/160 (46%), Positives = 113/160 (70%), Gaps = 15/160 (9%)

Query: 1   MISFLTGSIARFFIKFVPSLF----NLLEEYIMKEKSIEHDRLRLEIAKIQSTTQVDL-- 54
           + SFL G + RF ++F+PS F    +++ EY+ K++SIE+D+ +LE AKI S+ Q+DL  
Sbjct: 2   IQSFLAGGLFRFLLRFIPSSFERIVDVVSEYLTKKQSIEYDKWKLETAKIDSSLQLDLAD 61

Query: 55  -----KALESETPVRLARLQNQANEDQFERESKAMIFFNALIRPFTTLFWIILYPLLIWW 109
                + L+++ P++LAR++ Q      +   K +  FN L+RP TTLFWII+YP+++WW
Sbjct: 62  IKYGIEELKADKPIKLARIKAQ----NIKSGVKWIDSFNTLVRPLTTLFWIIVYPMMVWW 117

Query: 110 GVEKGYLTKDPLTLLAPFTQDIIACILGFWFTDTIVQRRK 149
            V++G   K PL++L+PF Q+IIACILGFWFTD IVQ+R+
Sbjct: 118 SVKEGIFDKSPLSILSPFEQEIIACILGFWFTDKIVQKRR 157


>gi|317120705|gb|ADV02527.1| hypothetical protein SC2_gp005 [Liberibacter phage SC2]
 gi|317120766|gb|ADV02587.1| hypothetical protein SC2_gp005 [Candidatus Liberibacter asiaticus]
          Length = 158

 Score =  209 bits (533), Expect = 9e-53,   Method: Composition-based stats.
 Identities = 77/161 (47%), Positives = 120/161 (74%), Gaps = 15/161 (9%)

Query: 1   MISFLTGSIARFFIKFVPSLF----NLLEEYIMKEKSIEHDRLRLEIAKIQSTTQVDLKA 56
           + SFL G + RF ++F+PS F    +++ EY+ K++S+E++++++E+AKI ++TQV+L+ 
Sbjct: 2   IQSFLAGGLFRFLLRFIPSSFERIVDVVSEYLTKKQSLEYNKMQIELAKINTSTQVNLEE 61

Query: 57  -------LESETPVRLARLQNQANEDQFERESKAMIFFNALIRPFTTLFWIILYPLLIWW 109
                  L+++ P+RLAR+++Q      + + K +  FNALIRP TTLFWI++YPLL+WW
Sbjct: 62  IKYGIEELKADKPIRLARVKSQ----NVKIDIKWINGFNALIRPLTTLFWIVVYPLLVWW 117

Query: 110 GVEKGYLTKDPLTLLAPFTQDIIACILGFWFTDTIVQRRKG 150
            V++   + DPLTLL+PFTQ+IIACILGFW+TD IVQ+R G
Sbjct: 118 SVKERMFSIDPLTLLSPFTQEIIACILGFWYTDKIVQKRWG 158


>gi|315122344|ref|YP_004062833.1| hypothetical protein CKC_02980 [Candidatus Liberibacter
           solanacearum CLso-ZC1]
 gi|313495746|gb|ADR52345.1| hypothetical protein CKC_02980 [Candidatus Liberibacter
           solanacearum CLso-ZC1]
          Length = 125

 Score =  173 bits (439), Expect = 7e-42,   Method: Composition-based stats.
 Identities = 62/131 (47%), Positives = 92/131 (70%), Gaps = 15/131 (11%)

Query: 29  MKEKSIEHDRLRLEIAKIQSTTQVDL-------KALESETPVRLARLQNQANEDQFERES 81
           M+++SIE+D+ +LE+A+   +TQ+DL       + L+ + P+RLAR++ Q     F+   
Sbjct: 1   MQKQSIEYDKTKLELAR--GSTQLDLADIKYAIEELKVDQPIRLARIKAQK----FKSGI 54

Query: 82  KAMIFFNALIRPFTTLFWIILYPLLIWW--GVEKGYLTKDPLTLLAPFTQDIIACILGFW 139
           K +  FNALIRP TT FWII+YPLL+W    V++G   + PL++L+PF QDIIACILGFW
Sbjct: 55  KWIDGFNALIRPLTTFFWIIIYPLLVWGIVCVKEGVFDRSPLSILSPFEQDIIACILGFW 114

Query: 140 FTDTIVQRRKG 150
           +TD IVQ+++ 
Sbjct: 115 YTDKIVQKKRS 125


>gi|315122566|ref|YP_004063055.1| hypothetical protein CKC_04090 [Candidatus Liberibacter
           solanacearum CLso-ZC1]
 gi|313495968|gb|ADR52567.1| hypothetical protein CKC_04090 [Candidatus Liberibacter
           solanacearum CLso-ZC1]
          Length = 130

 Score =  170 bits (432), Expect = 4e-41,   Method: Composition-based stats.
 Identities = 61/131 (46%), Positives = 92/131 (70%), Gaps = 10/131 (7%)

Query: 29  MKEKSIEHDRLRLEIAKIQSTTQVDL-------KALESETPVRLARLQNQANEDQFERES 81
           M+++SIE+++++LE  +IQS+TQ+DL       + L+ + P+RLAR++ Q  +   +   
Sbjct: 1   MQKRSIEYEKMKLEQTRIQSSTQLDLADIKLGIEELKVDQPIRLARIKAQQVKSGIQWID 60

Query: 82  KAMIFFNALIRPFTTLFWIILYPLLIWWG--VEKGYLTKDPLTLLAPFTQDIIACILGFW 139
                 NALIRP TTLFWII +PLL+WW   V++G   + PL++L+PF QDIIACILGFW
Sbjct: 61  AFNALINALIRPLTTLFWII-FPLLVWWSMGVKEGIFDRSPLSILSPFEQDIIACILGFW 119

Query: 140 FTDTIVQRRKG 150
           +TD IVQ+++ 
Sbjct: 120 YTDKIVQKKRS 130


>gi|315122770|ref|YP_004063259.1| hypothetical protein CKC_05125 [Candidatus Liberibacter
           solanacearum CLso-ZC1]
 gi|313496172|gb|ADR52771.1| hypothetical protein CKC_05125 [Candidatus Liberibacter
           solanacearum CLso-ZC1]
          Length = 124

 Score =  155 bits (392), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 52/127 (40%), Positives = 87/127 (68%), Gaps = 15/127 (11%)

Query: 1   MISFLTGSIARFFIKFVPSLFNLLE----EYIMKEKSIEHDRLRLEIAKIQSTTQVDL-- 54
           + SFL G + RF ++F+PS+F  +     EY+M+++SIE+D+++LE+A+I S+TQ+DL  
Sbjct: 2   IQSFLVGEVFRFALRFIPSVFEKIADGVLEYLMQKQSIEYDKMKLELARINSSTQLDLAD 61

Query: 55  -----KALESETPVRLARLQNQANEDQFERESKAMIFFNALIRPFTTLFWIILYPLLIWW 109
                + L+++  +RLAR++ Q      +   + +  FNA +RP T+LFWII+YPLL+WW
Sbjct: 62  IKLEIEELKADQLIRLARIKAQK----VKSGIQWIDGFNAFVRPLTSLFWIIVYPLLVWW 117

Query: 110 GVEKGYL 116
            V+ G+L
Sbjct: 118 SVKGGHL 124


>gi|315121790|ref|YP_004062279.1| hypothetical protein CKC_00200 [Candidatus Liberibacter
           solanacearum CLso-ZC1]
 gi|313495192|gb|ADR51791.1| hypothetical protein CKC_00200 [Candidatus Liberibacter
           solanacearum CLso-ZC1]
          Length = 121

 Score =  124 bits (312), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 35/122 (28%), Positives = 64/122 (52%), Gaps = 13/122 (10%)

Query: 1   MISFLTGSIARFFIKFVPSLFNLLE----EYIMKEKSIEHDRLRLEIAKIQSTTQVDL-- 54
           M SFL   + R  ++F+PS+F  +     EY+M+++SIE+D+ +LE+A+I  +TQ+DL  
Sbjct: 2   MESFLASGLFRLALRFIPSVFEKIADGVLEYLMQKQSIEYDKTKLELARINGSTQLDLAD 61

Query: 55  -----KALESETPVRLARLQNQANEDQFERESKAMIFFNALIRPFTTLFWIILYPLLIWW 109
                + L+ +  +RLAR++ Q  +       K +  F++L      LF      ++   
Sbjct: 62  IKYAIEELKVDQSIRLARIKAQKVKSG--SGVKWIDGFDSLNSTSHNLFLDYYLSVIGLV 119

Query: 110 GV 111
             
Sbjct: 120 EC 121


>gi|315122634|ref|YP_004063123.1| hypothetical protein CKC_04430 [Candidatus Liberibacter
           solanacearum CLso-ZC1]
 gi|313496036|gb|ADR52635.1| hypothetical protein CKC_04430 [Candidatus Liberibacter
           solanacearum CLso-ZC1]
          Length = 228

 Score =  123 bits (309), Expect = 8e-27,   Method: Composition-based stats.
 Identities = 38/111 (34%), Positives = 61/111 (54%), Gaps = 11/111 (9%)

Query: 13  FIKFVPSLFNLLEEYIMKEKSIEHDRLRLEIAKIQSTTQVDL-------KALESETPVRL 65
            I+  P  F  + E++M+++ IE+D+ +LE  +IQSTTQ+DL       + L+ + P+RL
Sbjct: 122 AIEMPPPKF--ISEHLMQKRFIEYDKTKLEQTRIQSTTQLDLADIKLGIEELKVDQPIRL 179

Query: 66  ARLQNQANEDQFERESKAMIFFNALIRPFTTLFWIILYPLLIWWGVEKGYL 116
           AR++ Q  +       K +  FN+LIRP TT F             E+G+L
Sbjct: 180 ARIKAQKVKSS--SGVKWIDGFNSLIRPLTTFFLDYYLSATRLVECERGHL 228


>gi|315122303|ref|YP_004062792.1| hypothetical protein CKC_02775 [Candidatus Liberibacter
           solanacearum CLso-ZC1]
 gi|313495705|gb|ADR52304.1| hypothetical protein CKC_02775 [Candidatus Liberibacter
           solanacearum CLso-ZC1]
          Length = 115

 Score =  119 bits (298), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 39/104 (37%), Positives = 64/104 (61%), Gaps = 16/104 (15%)

Query: 18  PSLFNLLE----EYIMKEKSIEHDRLRLEIAKIQSTTQVDL-------KALESETPVRLA 66
           PS+F  +     EY+M+++SIE+D++ LE+ +I S+TQ+DL       + L+ +  +RLA
Sbjct: 14  PSVFEKIADGVLEYLMQKQSIEYDKMNLELPRINSSTQLDLADIKYAIEELKVDQSIRLA 73

Query: 67  RLQNQANEDQFERESKAMIFFNALIRPFTTLFWIILYPLLIWWG 110
           R++ Q  ++      K +  FNALIRP TT FWII++    +W 
Sbjct: 74  RIKAQKVKNG--SGVKWIDGFNALIRPLTTFFWIIIF---RYWS 112


>gi|315122323|ref|YP_004062812.1| hypothetical protein CKC_02875 [Candidatus Liberibacter
           solanacearum CLso-ZC1]
 gi|313495725|gb|ADR52324.1| hypothetical protein CKC_02875 [Candidatus Liberibacter
           solanacearum CLso-ZC1]
          Length = 40

 Score = 76.6 bits (187), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 23/40 (57%), Positives = 32/40 (80%)

Query: 111 VEKGYLTKDPLTLLAPFTQDIIACILGFWFTDTIVQRRKG 150
           ++ G   + PL++L+PF QDIIACILGFW TD IVQ+++G
Sbjct: 1   MKGGIFDRSPLSILSPFEQDIIACILGFWCTDKIVQKKRG 40


>gi|315122322|ref|YP_004062811.1| hypothetical protein CKC_02870 [Candidatus Liberibacter
           solanacearum CLso-ZC1]
 gi|313495724|gb|ADR52323.1| hypothetical protein CKC_02870 [Candidatus Liberibacter
           solanacearum CLso-ZC1]
          Length = 55

 Score = 73.1 bits (178), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 22/59 (37%), Positives = 35/59 (59%), Gaps = 7/59 (11%)

Query: 52  VDLKALESETPVRLARLQNQANEDQFERESKAMIFFNALIRPFTTLFWIILYPLLIWWG 110
           + ++ L+ + P+RLAR++ Q      +   K +  FNALIRP TT FWII++    +W 
Sbjct: 1   MGIEELKVDQPIRLARIKAQK----VKSGVKWIDGFNALIRPLTTFFWIIVF---RYWS 52


>gi|315122321|ref|YP_004062810.1| hypothetical protein CKC_02865 [Candidatus Liberibacter
          solanacearum CLso-ZC1]
 gi|313495723|gb|ADR52322.1| hypothetical protein CKC_02865 [Candidatus Liberibacter
          solanacearum CLso-ZC1]
          Length = 45

 Score = 58.5 bits (140), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 17/46 (36%), Positives = 33/46 (71%), Gaps = 1/46 (2%)

Query: 5  LTGSIARFFIKFVPSLFNLLEEYIMKEKSIEHDRLRLEIAKIQSTT 50
          + G +    ++F PS+F+ + EY+M+++SIE+D+++ E  +IQS T
Sbjct: 1  MQGGLFS-ALRFFPSVFDGVLEYLMQKQSIEYDKMKPEQTRIQSAT 45


>gi|17547913|ref|NP_521315.1| hypothetical protein RSc3194 [Ralstonia solanacearum GMI1000]
 gi|17430219|emb|CAD16982.1| hypothetical transmembrane protein [Ralstonia solanacearum GMI1000]
          Length = 160

 Score = 45.4 bits (106), Expect = 0.003,   Method: Composition-based stats.
 Identities = 27/145 (18%), Positives = 57/145 (39%), Gaps = 13/145 (8%)

Query: 13  FIKFVPSLFNLLEEYIMKEKSIEHDRLR--LEIAKIQSTTQVDLKALESETPVRLARLQN 70
            +K++        E  M++K++E ++LR    +A+I ++          E       L++
Sbjct: 20  LLKWLDRKGERGHELAMQDKALEFEKLRGAQRMAEIGASADAAWNTGAIEA------LRD 73

Query: 71  QANEDQFERESKAMIFFNALIRPFTTLFWIILYPLLIW----WGVEKGY-LTKDPLTLLA 125
                  +   +     +  +RP  T  ++++Y  +         + G       L   +
Sbjct: 74  SITAQGEKTGVRWADALSTTVRPVVTYLFVLMYTGVKLSTFGGSAQAGVGFGPALLAAWS 133

Query: 126 PFTQDIIACILGFWFTDTIVQRRKG 150
              Q ++A IL FWF   + +RR G
Sbjct: 134 EADQALLAGILNFWFISRVWERRGG 158


>gi|20091901|ref|NP_617976.1| flagellar assembly protein J [Methanosarcina acetivorans C2A]
 gi|19917097|gb|AAM06456.1| flagella accessory protein J [Methanosarcina acetivorans C2A]
          Length = 520

 Score = 38.8 bits (89), Expect = 0.24,   Method: Composition-based stats.
 Identities = 20/89 (22%), Positives = 42/89 (47%), Gaps = 2/89 (2%)

Query: 21  FNLLEEYIMKE-KSIEHDRLRLEIAKIQSTTQVDLKALESETPVRLARLQNQANEDQFER 79
           ++   +YI ++ K +   +  + +A I S+ + +   L+ E  +R   + +   E   E 
Sbjct: 92  YSKACQYISQKLKDVYLSKFLVRMANILSSGEQEKNFLKQEKIIR-EEIYSNEYERSVES 150

Query: 80  ESKAMIFFNALIRPFTTLFWIILYPLLIW 108
             K    +NAL+   T +  IIL  ++I+
Sbjct: 151 LKKWTDGYNALMVSVTLVVTIILVSVMIY 179


>gi|315122366|ref|YP_004062855.1| hypothetical protein CKC_03090 [Candidatus Liberibacter
           solanacearum CLso-ZC1]
 gi|313495768|gb|ADR52367.1| hypothetical protein CKC_03090 [Candidatus Liberibacter
           solanacearum CLso-ZC1]
          Length = 52

 Score = 35.4 bits (80), Expect = 2.7,   Method: Composition-based stats.
 Identities = 16/47 (34%), Positives = 26/47 (55%), Gaps = 4/47 (8%)

Query: 106 LIWWGVEKGYLTKDPLTLLA----PFTQDIIACILGFWFTDTIVQRR 148
            IW G+E     +  +  L      + QDII+ +LGFWF+D +V++ 
Sbjct: 5   FIWQGIESELFDQKTIATLLVTILEYGQDIISSVLGFWFSDGVVKKE 51


>gi|53803115|ref|YP_115083.1| hypothetical protein MCA2679 [Methylococcus capsulatus str. Bath]
 gi|53756876|gb|AAU91167.1| conserved hypothetical protein [Methylococcus capsulatus str. Bath]
          Length = 158

 Score = 35.4 bits (80), Expect = 2.8,   Method: Composition-based stats.
 Identities = 30/160 (18%), Positives = 57/160 (35%), Gaps = 30/160 (18%)

Query: 7   GSIARFF---IKFVPSLFNLLEEYIMKEKSIEHDRLR--LEIAKIQSTTQVDLKALESET 61
           G   R     +K++        E  M++K++E ++LR    +A+I ++      +   E 
Sbjct: 11  GGAFRLAPEILKWLDRKGERGHELAMQDKALEFEKLRGAQRMAEIGASADAAWNSGAIEA 70

Query: 62  PVRLARLQNQANEDQFERESKAMIFFNALIRPFTTLFWIILY------------PLLIWW 109
                R Q +      +   +     ++ +RP  T +++ LY                 W
Sbjct: 71  LRDAVRTQGE------KTGVRWADALSSSVRPVITYWFMALYCAAKTAAFAAAVTAGAGW 124

Query: 110 GVEKGYLTKDPLTLLAPFTQDIIACILGFWFTDTIVQRRK 149
           GV         L       Q + A +L FWF   +  R +
Sbjct: 125 GV-------AILHAWTEADQALWAGVLNFWFLGRVFDRGR 157


>gi|329770469|ref|ZP_08261848.1| hypothetical protein HMPREF0433_01612 [Gemella sanguinis M325]
 gi|328836324|gb|EGF85990.1| hypothetical protein HMPREF0433_01612 [Gemella sanguinis M325]
          Length = 381

 Score = 34.6 bits (78), Expect = 4.2,   Method: Composition-based stats.
 Identities = 19/88 (21%), Positives = 37/88 (42%), Gaps = 5/88 (5%)

Query: 6   TGSIARFFIKFVPSLFNLLEEYIMKEKSIEHDRLRLEIAKIQSTTQVDLKALESETPVRL 65
            G +A  F+ F  S      +++++   IE     +EI  I    ++DL++   + P+ +
Sbjct: 245 AGGLAYGFLTFTNSEIKKGSDFMIEYLKIEEKIKEVEIV-ITGEGKLDLQSFMGKAPIEI 303

Query: 66  ARLQNQANEDQF----ERESKAMIFFNA 89
           ARL  +  +           K +   NA
Sbjct: 304 ARLAKKYKKSVIFLAGTISDKEIDTLNA 331


>gi|91205650|ref|YP_538005.1| hypothetical protein RBE_0835 [Rickettsia bellii RML369-C]
 gi|157826893|ref|YP_001495957.1| hypothetical protein A1I_02745 [Rickettsia bellii OSU 85-389]
 gi|91069194|gb|ABE04916.1| unknown [Rickettsia bellii RML369-C]
 gi|157802197|gb|ABV78920.1| hypothetical protein A1I_02745 [Rickettsia bellii OSU 85-389]
          Length = 152

 Score = 33.8 bits (76), Expect = 8.9,   Method: Composition-based stats.
 Identities = 25/154 (16%), Positives = 57/154 (37%), Gaps = 17/154 (11%)

Query: 1   MISFLTGSIARFFIKFVPSLFNLLEEYIMKEKSIEHDRLRLEIAKIQST---TQVDLKAL 57
           MI+ L  +I  F    +P +  + ++   K   I+    ++   K+  +   T++ +   
Sbjct: 1   MITLLA-AITGFISSIIPEILKIYKDINDKRHEIDILDRQITNNKLNQSKTFTELTISQE 59

Query: 58  ESETPVRLARLQNQANEDQFERESKAMIFFNALIRPFTTLFWIILYPLLIWW---GVEKG 114
            +E           A    ++     +   N  +RP     +  +Y ++ +     ++  
Sbjct: 60  MAEQ---------HALYSTYKSGVSWVDALNGSVRPVLAYSFFAMYGIVKYVQYKSLKSS 110

Query: 115 YLTKDPLTLL-APFTQDIIACILGFWFTDTIVQR 147
            L    L +L     Q I A I+ F+F     ++
Sbjct: 111 ALLVQYLDILWTIDDQTIFAGIISFYFGQRTFKK 144


>gi|85084787|ref|XP_957371.1| hypothetical protein NCU07146 [Neurospora crassa OR74A]
 gi|28918462|gb|EAA28135.1| predicted protein [Neurospora crassa OR74A]
 gi|28950244|emb|CAD71110.1| related to transport protein Uso1 [Neurospora crassa]
          Length = 1077

 Score = 33.5 bits (75), Expect = 9.9,   Method: Composition-based stats.
 Identities = 18/79 (22%), Positives = 31/79 (39%), Gaps = 3/79 (3%)

Query: 13  FIKFVPSLFNLLE---EYIMKEKSIEHDRLRLEIAKIQSTTQVDLKALESETPVRLARLQ 69
            +K     F+ L+   E  +K++  + D+L+ E AK     Q D   L++     L   +
Sbjct: 304 ALKQAQEAFDQLQAEKEKALKQERSDFDKLKTEQAKALRQAQSDFDKLKTGQEKVLEATK 363

Query: 70  NQANEDQFERESKAMIFFN 88
                +  E    A   FN
Sbjct: 364 TTFLAESLETIDHAKDNFN 382


  Database: nr
    Posted date:  May 22, 2011 12:22 AM
  Number of letters in database: 999,999,966
  Number of sequences in database:  2,987,313
  
  Database: /data/usr2/db/fasta/nr.01
    Posted date:  May 22, 2011 12:30 AM
  Number of letters in database: 999,999,796
  Number of sequences in database:  2,903,041
  
  Database: /data/usr2/db/fasta/nr.02
    Posted date:  May 22, 2011 12:36 AM
  Number of letters in database: 999,999,281
  Number of sequences in database:  2,904,016
  
  Database: /data/usr2/db/fasta/nr.03
    Posted date:  May 22, 2011 12:41 AM
  Number of letters in database: 999,999,960
  Number of sequences in database:  2,935,328
  
  Database: /data/usr2/db/fasta/nr.04
    Posted date:  May 22, 2011 12:46 AM
  Number of letters in database: 842,794,627
  Number of sequences in database:  2,394,679
  
Lambda     K      H
   0.317    0.138    0.413 

Lambda     K      H
   0.267   0.0420    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,752,607,798
Number of Sequences: 14124377
Number of extensions: 103143598
Number of successful extensions: 393593
Number of sequences better than 10.0: 53
Number of HSP's better than 10.0 without gapping: 37
Number of HSP's successfully gapped in prelim test: 42
Number of HSP's that attempted gapping in prelim test: 393486
Number of HSP's gapped (non-prelim): 83
length of query: 151
length of database: 4,842,793,630
effective HSP length: 114
effective length of query: 37
effective length of database: 3,232,614,652
effective search space: 119606742124
effective search space used: 119606742124
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.1 bits)
S2: 76 (33.8 bits)