HHsearch alignment for GI: 254780989 and conserved domain: COG1243

Probab=97.50  E-value=0.00012  Score=48.35  Aligned_cols=78  Identities=21%  Similarity=0.375  Sum_probs=53.9

Q ss_pred             ECCEEEEEEEEEEEEE-------CCCCEE-----EEE---EEEE-CHHHHCCCHHHHHHHHHHHHHHHCCCCEEEEE---
Q ss_conf             9878647999999886-------067848-----998---6775-25461599899999999999998899799995---
Q gi|254780989|r   70 DGDRIVGAIRATPIQI-------GKYKGF-----LRG---PLGV-LSEYRKRGIGSRLAYMSFMAIKNSGAEFVLID---  130 (185)
Q Consensus        70 ~d~~iVG~i~~~~~~~-------~~~~~~-----~l~---~laV-~P~~qg~GiG~~Li~~~l~~a~~~G~~~v~l~---  130 (185)
T Consensus       414 ~~d~lig~lrlR~p~e~~~r~e~~~~~aivrelhvyg~~vpig~~~~~~QH~G~G~~L~~~AE~ia~ee~~~ki~viSgi  493 (515)
T COG1243         414 KNDILIGFLRLREPSEGAHREEIDDKTAIVRELHVYGSEVPIGKREDEWQHRGYGRELLEEAERIAREEGAKKILVISGI  493 (515)
T ss_pred             HHHHHHHEEEECCCCCCHHHHHCCCCHHHHHHHHCCCCCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHCCCCEEEEECC
T ss_conf             23113312353244530010102663135543202021025666743010054789999999999876135617998333


Q ss_pred             CCHHHHHHCCCEEHHHC
Q ss_conf             08325431385870527
Q gi|254780989|r  131 AKHDWHKHLGFKKPHQH  147 (185)
Q Consensus       131 ~~~~~Y~r~GF~~~~~~  147 (185)
T Consensus       494 G~ReYy~k~GY~~~gpY  510 (515)
T COG1243         494 GVREYYRKLGYELDGPY  510 (515)
T ss_pred             CHHHHHHHHCCCCCCCC
T ss_conf             28999997386334772