HHsearch alignment for GI: 254780989 and conserved domain: COG3375
>COG3375 Uncharacterized conserved protein [Function unknown].
Probab=97.36 E-value=0.0024 Score=40.48 Aligned_cols=121 Identities=17% Similarity=0.123 Sum_probs=80.5
Q ss_pred EEC-CCCHHHHHHHHHHHHHHCCCCCCCCCCCEEHHHHHCHHCCCCCCCEEEEEEEEC-CEEEEEEEEEEEEECCCCEEE
Q ss_conf 751-379757899999999972787666756152025412000257665489999898-786479999998860678489
Q gi|254780989|r 15 TFA-NEQRVDQVAVDEVMVKAFLSTQEITDDVLHKYVRNNVEEPLSFVRLMSFVCRDG-DRIVGAIRATPIQIGKYKGFL 92 (185)
Q Consensus 15 ~IR-~a~~~D~~aI~~L~~~aF~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Vae~d-~~iVG~i~~~~~~~~~~~~~~ 92 (185)
T Consensus 4 vvrrl~dp~el~~~~dV~~~aWg~~d--~~~~~~d~i~-al----~~~GGlvlgAf~~dg~lVGls~G~pg~r~g~~y~y 76 (266)
T COG3375 4 VVRRLTDPAELDEAEDVQASAWGSED--RDGAPADTIR-AL----RYHGGLVLGAFSADGRLVGLSYGYPGGRGGSLYLY 76 (266)
T ss_pred EEEECCCHHHHHHHHHHHHHHHCCCC--CCCCHHHHHH-HH----HHCCCEEEEEECCCCCEEEEEECCCCCCCCCEEEE
T ss_conf 68753798998888889998717653--3544388999-99----86188699987389837878852577678755655
Q ss_pred EEEEEECHHHHCCCHHHHHHHHHHHHHHHCCCCEEEEECCHH-------HHHHCCCE
Q ss_conf 986775254615998999999999999988997999950832-------54313858
Q gi|254780989|r 93 RGPLGVLSEYRKRGIGSRLAYMSFMAIKNSGAEFVLIDAKHD-------WHKHLGFK 142 (185)
Q Consensus 93 l~~laV~P~~qg~GiG~~Li~~~l~~a~~~G~~~v~l~~~~~-------~Y~r~GF~ 142 (185)
T Consensus 77 SH~~gV~e~~k~sglg~aLK~~Qre~a~~~G~tli~WTfDPl~alNA~fNi~KLGa~ 133 (266)
T COG3375 77 SHMLGVREEVKGSGLGVALKMKQRERALSMGYTLIAWTFDPLNALNARFNISKLGAI 133 (266)
T ss_pred EEEHHCCCCCCCCCHHHHHHHHHHHHHHHCCEEEEEEECCCCHHHHHHCCHHHHCEE
T ss_conf 300214501034665565577778899865803678760654354431135551336