HHsearch alignment for GI: 254780989 and conserved domain: TIGR03019
>TIGR03019 pepcterm_femAB FemAB-related protein, PEP-CTERM system-associated. Members of this protein family are found always as part of extended exopolysaccharide biosynthesis loci in bacteria. In nearly every case, these loci contain determinants for the processing of the PEP-CTERM proposed C-terminal protein sorting signal. This family shows remote, local sequence similarity to the FemAB protein family (see pfam02388), whose members
Probab=91.39 E-value=1.2 Score=24.20 Aligned_cols=128 Identities=14% Similarity=0.075 Sum_probs=79.6
Q ss_pred CCCCEEECCCCHHHHHHHHHHHHHHCCCCCCCCCCCEEHHHHHCHHCCCCCCCEEEEEEEECCEEEEEEEEEEEEECCCC
Q ss_conf 00020751379757899999999972787666756152025412000257665489999898786479999998860678
Q gi|254780989|r 10 ELEGLTFANEQRVDQVAVDEVMVKAFLSTQEITDDVLHKYVRNNVEEPLSFVRLMSFVCRDGDRIVGAIRATPIQIGKYK 89 (185)
Q Consensus 10 ~~~~l~IR~a~~~D~~aI~~L~~~aF~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Vae~d~~iVG~i~~~~~~~~~~~ 89 (185)
T Consensus 148 ~K~Gl~v~~~~--dl~~FY~v~~~n~rrlG~--Pv~~~~~F~-~l~~~f~~~~~il~v~~~~g~~~ag~l~~~----~~~ 218 (330)
T TIGR03019 148 IKAGLTVTVDG--DLDRFYDVYAENMRDLGT--PVFSRRYFR-LLKDVFGEDCEVLTVRLGDGVVASAVLSFY----FRD 218 (330)
T ss_pred HHCCCEEEECC--CHHHHHHHHHHHHHHCCC--CCCCHHHHH-HHHHHCCCCCEEEEEEECCCCEEEEEEEEE----CCC
T ss_conf 87597456478--889999999999985799--999999999-999861667379999927996899999995----298
Q ss_pred EEEEEEEEECHHHHCCCHHHHHHHHHHHHHHHCCCCEEEEE------CCHHHHHHCCCEEHHH
Q ss_conf 48998677525461599899999999999998899799995------0832543138587052
Q gi|254780989|r 90 GFLRGPLGVLSEYRKRGIGSRLAYMSFMAIKNSGAEFVLID------AKHDWHKHLGFKKPHQ 146 (185)
Q Consensus 90 ~~~l~~laV~P~~qg~GiG~~Li~~~l~~a~~~G~~~v~l~------~~~~~Y~r~GF~~~~~ 146 (185)
T Consensus 219 ~v~~~y~as~~~~r~~~~n~llyW~~i~~A~e~G~~~fDFGrS~~~~G~~~FKk~WG~~p~pl 281 (330)
T TIGR03019 219 EVLPYYAGGLREARDVAANDLMYWELMRRACERGLRVFDFGRSKRGTGPFKFKKNWGFEPQPL 281 (330)
T ss_pred EEEEEEECCCHHHHHCCCHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCHHHHHCCCCEEEEE
T ss_conf 899965345198874581488999999999987996883799999996867785379833201