HHsearch results for GI: 254780989 and protein with PDBid: 1lrz_A
>1lrz_A FEMA, factor essential for expression of methicillin resistance; peptidoglycan, X-RAY crystallography, multiple anomalous dispersion; 2.10A {Staphylococcus aureus} SCOP: a.2.7.4 d.108.1.4 d.108.1.4
Probab=92.16 E-value=0.59 Score=24.72 Aligned_cols=114 Identities=11% Similarity=-0.003 Sum_probs=73.5
Q ss_pred CCCCEEECCCCHHHHHHHHHHHHHHCCCCCCCCCCCEEHHHHHCHHCCCCCCCEEEEEEEE-------------------
Q ss_conf 0002075137975789999999997278766675615202541200025766548999989-------------------
Q gi|254780989|r 10 ELEGLTFANEQRVDQVAVDEVMVKAFLSTQEITDDVLHKYVRNNVEEPLSFVRLMSFVCRD------------------- 70 (185)
Q Consensus 10 ~~~~l~IR~a~~~D~~aI~~L~~~aF~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Vae~------------------- 70 (185)
.-+|+++|..+++|.+...+++.....-. .. ...-.++.+.-+ +.... ....++|..
T Consensus 187 ~k~gv~i~~~~~edl~~f~~l~~~t~~R~-g~-~~~~~~yf~~l~-~~~~~-~~~~~~a~~~~~~~~~~~~~~~~~~~~~ 262 (426)
T 1lrz_A 187 KKNGVKVRFLSEEELPIFRSFMEDTSESK-AF-ADRDDKFYYNRL-KYYKD-RVLVPLAYINFDEYIKELNEERDILNKD 262 (426)
T ss_dssp HTSSCEEEECCGGGHHHHHHHC--------------CHHHHHHHH-HHHGG-GEECEEEEEEHHHHHHHHHHHHHHHHHH
T ss_pred HHCCEEEEECCHHHHHHHHHHHHHHHHCC-CC-CCCCHHHHHHHH-HHCCC-CEEEEEEEECHHHHHHHHHHHHHHHHHH
T ss_conf 86692999646457999999999999706-99-989999999999-85156-6279987502578999888877777777
Q ss_pred ----------------------------------------------CCEEEEEEEEEEEEECCCCEEEEEEEEECHHHHC
Q ss_conf ----------------------------------------------8786479999998860678489986775254615
Q gi|254780989|r 71 ----------------------------------------------GDRIVGAIRATPIQIGKYKGFLRGPLGVLSEYRK 104 (185)
Q Consensus 71 ----------------------------------------------d~~iVG~i~~~~~~~~~~~~~~l~~laV~P~~qg 104 (185)
++++|+.+.+.. .+....++ --+..++++.
T Consensus 263 ~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ia~~l~~~---~~~~~~y~-y~gs~~~~~~ 338 (426)
T 1lrz_A 263 LNKALKDIEKRPENKKAHNKRDNLQQQLDANEQKIEEGKRLQEEHGNELPISAGFFFI---NPFEVVYY-AGGTSNAFRH 338 (426)
T ss_dssp HHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSEEEEEEEEEEE---CSSCEEEE-EEEECGGGGG
T ss_pred HHHHHHHHHHCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEE---ECCEEEEE-ECCCCHHHHH
T ss_conf 8888877642510233201035578899988866667778888506995799999999---89999999-5231476673
Q ss_pred CCHHHHHHHHHHHHHHHCCCCEEEEEC
Q ss_conf 998999999999999988997999950
Q gi|254780989|r 105 RGIGSRLAYMSFMAIKNSGAEFVLIDA 131 (185)
Q Consensus 105 ~GiG~~Li~~~l~~a~~~G~~~v~l~~ 131 (185)
.+-...|.-++|++|+++|+...-+.|
T Consensus 339 ~~~~~~l~w~~i~~a~~~G~~~yd~gG 365 (426)
T 1lrz_A 339 FAGSYAVQWEMINYALNHGIDRYNFYG 365 (426)
T ss_dssp GCHHHHHHHHHHHHHHHTTCCEEEEEE
T ss_pred CCHHHHHHHHHHHHHHHCCCCEEEECC
T ss_conf 492599999999999987998998179