HHsearch results for GI: 254780989 and protein with PDBid: 1ro5_A
>1ro5_A Autoinducer synthesis protein LASI; alpha-beta-alpha sandwich, phosphopantetheine fold, signaling protein; 2.30A {Pseudomonas aeruginosa} SCOP: d.108.1.3
Probab=98.71 E-value=6e-07 Score=60.82 Aligned_cols=125 Identities=5% Similarity=-0.071 Sum_probs=90.2
Q ss_pred EECC-CCHHHHHHHHHHHHHHCCCCCCCCCCCEEHHHHHCHHCCCCCCCEEEEEEEECCEEEEEEEEEEEEE--------
Q ss_conf 7513-7975789999999997278766675615202541200025766548999989878647999999886--------
Q gi|254780989|r 15 TFAN-EQRVDQVAVDEVMVKAFLSTQEITDDVLHKYVRNNVEEPLSFVRLMSFVCRDGDRIVGAIRATPIQI-------- 85 (185)
Q Consensus 15 ~IR~-a~~~D~~aI~~L~~~aF~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Vae~d~~iVG~i~~~~~~~-------- 85 (185)
..|. ..+++...+.+|-.++|-............ ...+..+......+++..+|++||++.+.+.+-
T Consensus 9 ~~~~~~~~~~~~~~~rlR~~VFv~e~gw~~~~~~~----~E~D~~D~~~~~~lv~~~~g~vvg~~Rl~~~~~~~~l~~~f 84 (201)
T 1ro5_A 9 GRREEFDKKLLGEMHKLRAQVFKERKGWDVSVIDE----MEIDGYDALSPYYMLIQEDGQVFGCWRILDTTGPYMLKNTF 84 (201)
T ss_dssp EEGGGSCHHHHHHHHHHHHHHHTTCSSSCCCEETT----EECCGGGGSCCEEEEEEETTEEEEEEEEEETTSCCHHHHTC
T ss_pred ECHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCH----HCCCCCCCCCCEEEEEECCCCEEEEEEECCCCCCCCCCCHH
T ss_conf 01430999999999999999987752898899721----11035787785799971698168998632689886420322
Q ss_pred ----------CCCCEEEEEEEEECHHHHCCC----HHHHHHHHHHHHHHHCCCCEEEEECCHH---HHHHCCCEE
Q ss_conf ----------067848998677525461599----8999999999999988997999950832---543138587
Q gi|254780989|r 86 ----------GKYKGFLRGPLGVLSEYRKRG----IGSRLAYMSFMAIKNSGAEFVLIDAKHD---WHKHLGFKK 143 (185)
Q Consensus 86 ----------~~~~~~~l~~laV~P~~qg~G----iG~~Li~~~l~~a~~~G~~~v~l~~~~~---~Y~r~GF~~ 143 (185)
.+...+.++.++|+|++++++ ++..|+..+.+.+.+.|.+.++...++. +|.|+||..
T Consensus 85 ~~~~~~~~~~~~~~i~E~sR~~V~~~~r~~~~~~~~~~~L~~~~~~~a~~~Gi~~~~~~~~~~~~r~~~r~G~~~ 159 (201)
T 1ro5_A 85 PELLHGKEAPCSPHIWELSRFAINSGQKGSLGFSDCTLEAMRALARYSLQNDIQTLVTVTTVGVEKMMIRAGLDV 159 (201)
T ss_dssp GGGGTTCCCCCCTTEEEEEEEEECCSTTCCSCSHHHHHHHHHHHHHHHHTTTCCEEEEEEEHHHHHHHHHTTCEE
T ss_pred HHHCCCCCCCCCCCEEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEECHHHHHHHHHCCCCE
T ss_conf 354268765788866999989984321456553189999999999999988998999994589999999869975