HHsearch results for GI: 254780989 and protein with PDBid: 1u6m_A
>1u6m_A Acetyltransferase, GNAT family; structural genomics, PSI, protein structure initiative; 2.40A {Enterococcus faecalis} SCOP: d.108.1.1
Probab=99.77 E-value=1.3e-18 Score=131.13 Aligned_cols=154 Identities=13% Similarity=0.152 Sum_probs=107.4
Q ss_pred EEECCCCHHHHHHHHHHHHHHCCCCCCC-----CCCCEEHHHHHCHHC-CCCCCCEEEEEEEECCEEEEEEEEEEEEE--
Q ss_conf 0751379757899999999972787666-----756152025412000-25766548999989878647999999886--
Q gi|254780989|r 14 LTFANEQRVDQVAVDEVMVKAFLSTQEI-----TDDVLHKYVRNNVEE-PLSFVRLMSFVCRDGDRIVGAIRATPIQI-- 85 (185)
Q Consensus 14 l~IR~a~~~D~~aI~~L~~~aF~~~~~~-----~~~~~~~~~~~~~~~-~~~~~~~l~~Vae~d~~iVG~i~~~~~~~-- 85 (185)
+.||.+|++|.++|.+|...+|.+.... ........+...... ........+||++++++|+|++.......
T Consensus 2 ~~IR~at~~D~~ai~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~va~~~~~i~g~~~~~~~~~~~ 81 (199)
T 1u6m_A 2 SLIRSATKEDGQAIARLVLVILKDMELPILEEVSEEQMIDLLAEATAYPTYRYGYQRILVYEHAGEVAGIAVGYPAEDEK 81 (199)
T ss_dssp CEEEECCGGGHHHHHHHHHHHHHHSCCGGGGTSCHHHHHHHHHHHHTSTTSTTCGGGEEEEEETTEEEEEEEEEEGGGTT
T ss_pred CEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCEEEEEEEEECCCCCC
T ss_conf 58788969999999999999999733310256899999999999874812136554199999999899999963166310
Q ss_pred --------------------------CCCCEEEEEEEEECHHHHCCCHHHHHHHHHHHHHHHCCCCEEEEECCH------
Q ss_conf --------------------------067848998677525461599899999999999998899799995083------
Q gi|254780989|r 86 --------------------------GKYKGFLRGPLGVLSEYRKRGIGSRLAYMSFMAIKNSGAEFVLIDAKH------ 133 (185)
Q Consensus 86 --------------------------~~~~~~~l~~laV~P~~qg~GiG~~Li~~~l~~a~~~G~~~v~l~~~~------ 133 (185)
...+..+|..|+|+|+|||+|+|++||+.+++.+++.|+..+.|.+++
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~I~~l~V~p~~Rg~GlG~~Ll~~~~~~a~~~g~~~i~L~v~~~N~~a~ 161 (199)
T 1u6m_A 82 IIDEPLREVFKKHGLAEDVRLFIEEETLPNEWYLDTISVDERFRGMGIGSKLLDALPEVAKASGKQALGLNVDFDNPGAR 161 (199)
T ss_dssp TSSHHHHHHHHHTTSCTTCCCCCCCCCCTTEEEEEEEEECGGGTTSSHHHHHHHTHHHHHHTTTCSEEEEEEETTCHHHH
T ss_pred CCCHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEEEEECHHHCCCCCCHHHHHHHHHHHHHCCCCEEEEEEECCCHHHH
T ss_conf 00012333310024443322234445679859999899999993999721689999999998699589999807999999
Q ss_pred HHHHHCCCEEHHHCCCCCCCCCCCHHHEEEEECCCCCCC
Q ss_conf 254313858705278267798888232265440579765
Q gi|254780989|r 134 DWHKHLGFKKPHQHQIRYAHGGGAATDWLVHIFKNNIME 172 (185)
Q Consensus 134 ~~Y~r~GF~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~ 172 (185)
.||+|+||+...+..+ .+. +-..|+|+|.+|+-.
T Consensus 162 ~~Y~k~GF~~~~~~~~----~g~-~~~~m~k~~~~~~~~ 195 (199)
T 1u6m_A 162 KLYASKGFKDVTTMTI----SGH-LYNHMQKEVEGGSHH 195 (199)
T ss_dssp HHHHTTTCEEEEEEEE----TTE-EEEEEEEEC------
T ss_pred HHHHHCCCEEEEEEEE----CCC-EEEEEEEECCCCCCC
T ss_conf 9999889989869998----990-879999983899776