HHsearch results for GI: 254780989 and protein with PDBid: 1yk3_A
>1yk3_A Hypothetical protein RV1347C/MT1389; acyltransferase, GCN5-related fold, structural genomics, PSI, protein structure initiative; HET: BOG; 2.20A {Mycobacterium tuberculosis} SCOP: d.108.1.1
Probab=99.32 E-value=3.2e-11 Score=86.61 Aligned_cols=134 Identities=13% Similarity=-0.012 Sum_probs=96.0
Q ss_pred CCEEECCCCHHHHHHHHHHHH----HHCCCCCCCCCCCEEHHHHHCHHCCCCCCCEEEEEEEECCEEEEEEEEEEEEEC-
Q ss_conf 020751379757899999999----972787666756152025412000257665489999898786479999998860-
Q gi|254780989|r 12 EGLTFANEQRVDQVAVDEVMV----KAFLSTQEITDDVLHKYVRNNVEEPLSFVRLMSFVCRDGDRIVGAIRATPIQIG- 86 (185)
Q Consensus 12 ~~l~IR~a~~~D~~aI~~L~~----~aF~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Vae~d~~iVG~i~~~~~~~~- 86 (185)
+.+++|..+++|.+.+.+... ..|+...... +..+..+...........|+++.||+.+|++.+....-+
T Consensus 41 ~~~~LR~~~~~D~~~l~~w~ndp~V~~~~~~~~~~-----e~~~~~~~~~~~~~~~~~~i~~~dg~~iG~~~~~~~~~~~ 115 (210)
T 1yk3_A 41 PPYGLRVAQLTDAEMLAEWMNRPHLAAAWEYDWPA-----SRWRQHLNAQLEGTYSLPLIGSWHGTDGGYLELYWAAKDL 115 (210)
T ss_dssp TTEEEEECCGGGHHHHHHHHTSHHHHHHHCCCCCH-----HHHHHHHHHHHTSSSEEEEEEEETTEEEEEEEEEEGGGBG
T ss_pred CCEEEECCCHHHHHHHHHHHCCHHHHHHHCCCCCH-----HHHHHHHHHHHCCCCEEEEEEEECCEEEEEEEEECCCCCC
T ss_conf 98699629889999999997599999871799999-----9999999974234745899999999998744676154442
Q ss_pred -------CCCEEEEEEEEECHHHHCCCHHHHHHHHHHHHHHH--CCCCEEEEECCHH------HHHHCCCEEHHHCCCC
Q ss_conf -------67848998677525461599899999999999998--8997999950832------5431385870527826
Q gi|254780989|r 87 -------KYKGFLRGPLGVLSEYRKRGIGSRLAYMSFMAIKN--SGAEFVLIDAKHD------WHKHLGFKKPHQHQIR 150 (185)
Q Consensus 87 -------~~~~~~l~~laV~P~~qg~GiG~~Li~~~l~~a~~--~G~~~v~l~~~~~------~Y~r~GF~~~~~~~i~ 150 (185)
......+..+.++|++||+|+|+.+++.+++.+.. .|...|++..+.+ +|+|+||+...+++..
T Consensus 116 ~~~~~~~~~~~~~~~~~i~~~~~~G~G~g~~al~~ll~~~f~~~~~~~ri~~~v~~~N~~s~rl~ek~GF~~~ge~~~p 194 (210)
T 1yk3_A 116 ISHYYDADPYDLGLHAAIADLSKVNRGFGPLLLPRIVASVFANEPRCRRIMFDPDHRNTATRRLCEWAGCKFLGEHDTT 194 (210)
T ss_dssp GGGSSCCCTTCEEEEEEESCHHHHTTTHHHHHHHHHHHHHHHHCTTCCEEEECCBTTCHHHHHHHHHHTCEEEEEEECS
T ss_pred CCCCCCCCCCCEEEEEEEECHHHCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHHCCCEEEEEEECC
T ss_conf 2223368888459999996656516757999999999999973889209999987478999999997699898898179