HHsearch results for GI: 254780989 and protein with PDBid: 2cnt_A
>2cnt_A Modification of 30S ribosomal subunit protein S18; N-alpha acetylation, GCN5-N-acetyltransferase, ribosomal protein, acetyltransferase; HET: COA; 2.4A {Salmonella typhimurium} PDB: 2cnm_A* 2cns_A*
Probab=99.81 E-value=3.3e-19 Score=134.71 Aligned_cols=142 Identities=15% Similarity=0.164 Sum_probs=108.4
Q ss_pred EEECCCCHHHHHHHHHHHHHHCCCCCCCCCCCEEHHHHHCHHCCCCCCCEEEEEEEECCEEEEEEEEEEEEECCCCEEEE
Q ss_conf 07513797578999999999727876667561520254120002576654899998987864799999988606784899
Q gi|254780989|r 14 LTFANEQRVDQVAVDEVMVKAFLSTQEITDDVLHKYVRNNVEEPLSFVRLMSFVCRDGDRIVGAIRATPIQIGKYKGFLR 93 (185)
Q Consensus 14 l~IR~a~~~D~~aI~~L~~~aF~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Vae~d~~iVG~i~~~~~~~~~~~~~~l 93 (185)
.+||.++++|.++|.+|.+++|...+. . ..+.+.+.. ..+++|++.+|++||++.+++. .+...|
T Consensus 2 ~~Ir~lt~~Dl~~v~~Ie~~af~~pws--~----~~~~~~~~~-----~~~~~v~~~~~~ivG~~~~~~~----~~~~~I 66 (160)
T 2cnt_A 2 NTISILSTTDLPAAWQIEQRAHAFPWS--E----KTFFGNQGE-----RYLNLKLTADDRMAAFAITQVV----LDEATL 66 (160)
T ss_dssp EEEEECCGGGHHHHHHHHHHHCSSCCC--H----HHHHHSCST-----TBCCEEEEETTEEEEEEEEEEE----TTEEEE
T ss_pred CEEEECCHHHHHHHHHHHHHHCCCCCC--H----HHHHHHHHC-----CCEEEEEEECCEEEEEEEEEEC----CCEEEE
T ss_conf 682369999999999999986589998--9----999987448-----9389999999989999999980----996999
Q ss_pred EEEEECHHHHCCCHHHHHHHHHHHHHHHCCCCEEEEECCH------HHHHHCCCEEHHHCCCCCCC-CCCCHHHEEEEEC
Q ss_conf 8677525461599899999999999998899799995083------25431385870527826779-8888232265440
Q gi|254780989|r 94 GPLGVLSEYRKRGIGSRLAYMSFMAIKNSGAEFVLIDAKH------DWHKHLGFKKPHQHQIRYAH-GGGAATDWLVHIF 166 (185)
Q Consensus 94 ~~laV~P~~qg~GiG~~Li~~~l~~a~~~G~~~v~l~~~~------~~Y~r~GF~~~~~~~i~~~~-~~~~~~~~~~~~l 166 (185)
..++|+|+|||+|+|++|++.+++.++++|+..+.+...+ .||+|+||+......=.++. .+..|..+|.|.|
T Consensus 67 ~~l~V~p~~rg~Gig~~Ll~~~~~~~~~~~~~~i~l~v~~~N~~a~~fY~k~GF~~~g~~~~yy~~~~~~~D~~~m~~~l 146 (160)
T 2cnt_A 67 FNIAVDPDFQRRGLGRMLLEHLIDELETRGVVTLWLEVRASNAAAIALYESLGFNEATIRRNYYPTAQGHEDAIIMALPI 146 (160)
T ss_dssp EEEEECGGGCSSSHHHHHHHHHHHHHHHTTCCEEEEEEETTCHHHHHHHHHHTCEEEEEEEEEEEETTEEEEEEEEEEEC
T ss_pred EEEEEEHHHHHCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHCCCEEEEEEECCEECCCCCEEEEEEEEEE
T ss_conf 99999368743885689999999999963984899998748499999999889999849938374899988999999484
Q ss_pred CCCC
Q ss_conf 5797
Q gi|254780989|r 167 KNNI 170 (185)
Q Consensus 167 ~~~~ 170 (185)
+-..
T Consensus 147 ~~~~ 150 (160)
T 2cnt_A 147 SMKL 150 (160)
T ss_dssp CCCC
T ss_pred ECCC
T ss_conf 5121