HHsearch alignment for GI: 254780991 and conserved domain: CHL00122

Probab=98.58  E-value=1.2e-05  Score=60.96  Aligned_cols=97  Identities=22%  Similarity=0.263  Sum_probs=76.0

Q ss_pred             CCCCCCC-CCCEECCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCEEEECCCCCC--HHHHHHHHH
Q ss_conf             1244677-2000013310168899999986302321246621478999999998635966873257645--789999999
Q gi|254780991|r  550 RPTGLVD-PPVEIRSARTQVEDVYDEINLAAQQGLRILLTVLTKRMAEDLTEYLYERNIRVRYMHSEVK--TLERIEIIR  626 (805)
Q Consensus       550 rptg~id-p~ieir~~~~qvddl~~ei~~~~~~~~R~l~~~~tkr~~e~l~~~~~~~~i~~~~~h~~~~--~~~r~~il~  626 (805)
T Consensus       391 ~p~~R~D~~d~vy~t~~~K~~Av~~ei~~~h~~GqPVLvGT~SVe~SE~ls~~L~~~gi~h~vLNAk~~n~~~EA~IiA~  470 (891)
T CHL00122        391 RPMQRKDLPDLVYKTEYSKWKAIADECFDMHKIGRPILVGTTSVEKSELLSQLLEEYQLPHNLLNAKPENVKRESEIIAQ  470 (891)
T ss_pred             CCCEEEECCCEEECCHHHHHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHCCCCCHHHCCCCCCHHHHHHHHHH
T ss_conf             98500308895778899999999999999996799989834655889999999997478622023884307899999995


Q ss_pred             HHHCCCCCEEEEHHHHHCCCCC
Q ss_conf             9731898699984587535787
Q gi|254780991|r  627 DLRLGKFDVLVGINLLREGLDI  648 (805)
Q Consensus       627 ~~~~g~~diLvgt~~~akGlD~  648 (805)
T Consensus       471 AG~~ga--VTIATNMAGRGTDI  490 (891)
T CHL00122        471 AGRKGA--ITIATNMAGRGTDI  490 (891)
T ss_pred             CCCCCC--EEEECCCCCCCCCE
T ss_conf             699993--89715556898784