HHsearch alignment for GI: 254780991 and conserved domain: COG0593
>COG0593 DnaA ATPase involved in DNA replication initiation [DNA replication, recombination, and repair].
Probab=91.70 E-value=1 Score=23.97 Aligned_cols=143 Identities=17% Similarity=0.155 Sum_probs=81.0
Q ss_pred CCCHHHHHHHHHHHHHC-CCCEEEEEEECCCCHHHHHHHHHH---HCCC--CEEEEECCH-------HHHHHHHHHHHHH
Q ss_conf 88438999999998873-973379986337646999999999---7199--789993163-------4689999999986
Q gi|254780991|r 150 SGDQPAAIAQLLKGIHS-REKVQLLLGVTGSGKTFTMAKVIE---AMQR--PAIVMAPNK-------ILAAQLYSEFKNF 216 (805)
Q Consensus 150 ~gdQ~~Ai~~L~~~l~~-g~~~qlL~GVTGSGKTevya~lI~---~~gr--~aLvLvPei-------~La~QL~~rfk~~ 216 (805)
T Consensus 94 ~N~~A~aa~~~va~~~g~~~nplfi~G~~GlGKTHLl~Aign~~~~~~~~a~v~y~~se~f~~~~v~a~~~~~~~~Fk~~ 173 (408)
T COG0593 94 SNRLAYAAAKAVAENPGGAYNPLFIYGGVGLGKTHLLQAIGNEALANGPNARVVYLTSEDFTNDFVKALRDNEMEKFKEK 173 (408)
T ss_pred CHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 44999999999875668868957998799997899999999999862998648850489989999999885048888876
Q ss_pred CCCCEEEEEEECCCCCCCCCCCCCCCCCHHHHCCCCHHHHHHHHHHHHHHHCCCCEEEECCHHHHCCCCCHHHHHCCEEE
Q ss_conf 78983899862134444210155543210221035889999999999998549984998277896168983477225799
Q gi|254780991|r 217 FPHNAVEYFVSYYDYYQPEAYVPRTDTYIEKESSINEQIDRMRHSATRSLLERNDCIVVSSVSCIYGIGSVESYSQMIVQ 296 (805)
Q Consensus 217 Fp~n~V~~f~S~~~~yqpEay~p~~d~~i~k~~s~n~~i~~~R~~a~~~l~~~~~~IVVgsrSAIfgl~~P~~~lglIIv 296 (805)
T Consensus 174 y-~~dlllI-DDiq-----------------~l~gk~~~qeefFh~FN~l~~~~kqIvltsdr------~P~~l~~~--- 225 (408)
T COG0593 174 Y-SLDLLLI-DDIQ-----------------FLAGKERTQEEFFHTFNALLENGKQIVLTSDR------PPKELNGL--- 225 (408)
T ss_pred H-CCCEEEE-CHHH-----------------HHCCCHHHHHHHHHHHHHHHHCCCEEEEECCC------CCHHHCCC---
T ss_conf 4-2673555-1386-----------------75677157999999999888508879997078------83221103---
Q ss_pred EECCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHCCCCEEEECCCCCHHHH
Q ss_conf 94198111787532343117656338775453318724783178887788
Q gi|254780991|r 297 LKIGDSVEQKELLSSLVKQQYKRQDIGIIRGTFRVCGDSIEIFPSHLEDV 346 (805)
Q Consensus 297 dEehd~~~~~~~~~~l~~~~Y~R~D~a~~RG~f~~rg~ILdsatps~Es~ 346 (805)
T Consensus 226 -------------------------~~rL~SR~~-~Gl~~~I~~Pd~e~r 249 (408)
T COG0593 226 -------------------------EDRLRSRLE-WGLVVEIEPPDDETR 249 (408)
T ss_pred -------------------------CHHHHHHHH-CEEEEEECCCCHHHH
T ss_conf -------------------------588998986-305775279888999