HHsearch alignment for GI: 254780991 and conserved domain: COG0630

>COG0630 VirB11 Type IV secretory pathway, VirB11 components, and related ATPases involved in archaeal flagella biosynthesis [Cell motility and secretion / Intracellular trafficking and secretion].

Probab=90.01  E-value=1.4  Score=22.88  Aligned_cols=97  Identities=24%  Similarity=0.268  Sum_probs=58.2

Q ss_pred             HHHHHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHCCCCEEEEEEECCCCC
Q ss_conf             38999999998873973379986337646999999999719978999316346899999999867898389986213444
Q gi|254780991|r  153 QPAAIAQLLKGIHSREKVQLLLGVTGSGKTFTMAKVIEAMQRPAIVMAPNKILAAQLYSEFKNFFPHNAVEYFVSYYDYY  232 (805)
Q Consensus       153 Q~~Ai~~L~~~l~~g~~~qlL~GVTGSGKTevya~lI~~~gr~aLvLvPei~La~QL~~rfk~~Fp~n~V~~f~S~~~~y  232 (805)
T Consensus       129 ~~~~~ayL~~~ie~~-~siii~G~t~sGKTt~lnall~~Ip~~~rivtIEdt~------E~~~-~~~n~~~l~~r~~~~~  200 (312)
T COG0630         129 SPEQAAYLWLAIEAR-KSIIICGGTASGKTTLLNALLDFIPPEERIVTIEDTP------ELKL-PHENWVQLVTREGESG  200 (312)
T ss_pred             CHHHHHHHHHHHHCC-CCEEEECCCCCCHHHHHHHHHHHCCCCCCEEEECCCC------EECC-CCCCEEEEEECCCCCC
T ss_conf             888999999999769-9499988888864959999986378522189952555------4147-8876589983257776


Q ss_pred             CCCCCCCCCCCCHHHHCCCCHHHHHHHHHHHH-HHHCCCCEEEECCH
Q ss_conf             42101555432102210358899999999999-98549984998277
Q gi|254780991|r  233 QPEAYVPRTDTYIEKESSINEQIDRMRHSATR-SLLERNDCIVVSSV  278 (805)
Q Consensus       233 qpEay~p~~d~~i~k~~s~n~~i~~~R~~a~~-~l~~~~~~IVVgsr  278 (805)
T Consensus       201 ---------------~~~v~------~~dll~aalR~rPd~IivgEv  226 (312)
T COG0630         201 ---------------SSEVS------LEDLLRAALRQRPDYIIVGEL  226 (312)
T ss_pred             ---------------CCCCC------HHHHHHHHHCCCCCEEEEEEE
T ss_conf             ---------------56666------999999986239986999633