HHsearch alignment for GI: 254780991 and conserved domain: COG1201

>COG1201 Lhr Lhr-like helicases [General function prediction only].
Probab=99.79  E-value=3.3e-17  Score=147.47  Aligned_cols=123  Identities=25%  Similarity=0.292  Sum_probs=106.7

Q ss_pred             CHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCC-CEEEECCCCCCHHHHHHHHHHHHCCCCCEEEEHHHHHC
Q ss_conf             01688999999863023212466214789999999986359-66873257645789999999973189869998458753
Q gi|254780991|r  566 TQVEDVYDEINLAAQQGLRILLTVLTKRMAEDLTEYLYERN-IRVRYMHSEVKTLERIEIIRDLRLGKFDVLVGINLLRE  644 (805)
Q Consensus       566 ~qvddl~~ei~~~~~~~~R~l~~~~tkr~~e~l~~~~~~~~-i~~~~~h~~~~~~~r~~il~~~~~g~~diLvgt~~~ak  644 (805)
T Consensus       237 ~~~~~~~~~i~~~v~~~~ttLIF~NTR~~aE~l~~~L~~~~~~~i~~HHgSlSre~R~~vE~~lk~G~lravV~TSSLEL  316 (814)
T COG1201         237 ELWAALYERIAELVKKHRTTLIFTNTRSGAERLAFRLKKLGPDIIEVHHGSLSRELRLEVEERLKEGELKAVVATSSLEL  316 (814)
T ss_pred             CHHHHHHHHHHHHHHHCCCEEEEEECHHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCCHHH
T ss_conf             24678999999999616858999727278999999998726875565316665778999999986688629998064220


Q ss_pred             CCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHCC--CCCCEEEEEECCC
Q ss_conf             578777117999628856744460137766543127--9986699982489
Q gi|254780991|r  645 GLDIPECGLVAILDADKEGFLRSKTSLIQTIGRAAR--NVNSKVILYADTI  693 (805)
Q Consensus       645 GlD~p~v~lV~i~dAD~~~f~~~~~~~~q~~GRagR--~~~G~~il~ad~~  693 (805)
T Consensus       317 GIDiG~vdlVIq~~S-----P~sV~r~lQRiGRsgHr~~~~Skg~ii~~~r  362 (814)
T COG1201         317 GIDIGDIDLVIQLGS-----PKSVNRFLQRIGRAGHRLGEVSKGIIIAEDR  362 (814)
T ss_pred             CCCCCCCEEEEEECC-----CHHHHHHHHHCCCCCCCCCCCCCEEEEECCH
T ss_conf             502477429998179-----3888888685031466568864279981679