HHsearch alignment for GI: 254780991 and conserved domain: KOG0240
>KOG0240 consensus.
Probab=94.37 E-value=0.13 Score=30.71 Aligned_cols=86 Identities=20% Similarity=0.342 Sum_probs=55.5
Q ss_pred CCEEEEECCCCCCCHHH----HHHHHHHHHHCCCC-EEEEEEECCCCHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHH
Q ss_conf 75477518888884389----99999998873973-37998633764699999999971997899931634689999999
Q gi|254780991|r 139 TFFQMQTDYHPSGDQPA----AIAQLLKGIHSREK-VQLLLGVTGSGKTFTMAKVIEAMQRPAIVMAPNKILAAQLYSEF 213 (805)
Q Consensus 139 ~~f~l~~~~~P~gdQ~~----Ai~~L~~~l~~g~~-~qlL~GVTGSGKTevya~lI~~~gr~aLvLvPei~La~QL~~rf 213 (805)
T Consensus 49 ~~y~FDrVF~pnatQe~Vy~~~a~~Iv~dVL~GYNGTvfaYGqT~sGKTytm~G~~~d~--------~~~GIipRi~~di 120 (607)
T KOG0240 49 KTYVFDRVFSPNATQEDVYEFAAKPIVDDVLLGYNGTVFAYGQTGSGKTYTMEGIGHDP--------EEMGIIPRILNDI 120 (607)
T ss_pred CCCEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCEEECCCCCCH--------HHCCCHHHHHHHH
T ss_conf 64000030599711999999988999999865665158996578888512302567872--------3137478999999
Q ss_pred HHHC---CCC-EEEEEEECCCCC
Q ss_conf 9867---898-389986213444
Q gi|254780991|r 214 KNFF---PHN-AVEYFVSYYDYY 232 (805)
Q Consensus 214 k~~F---p~n-~V~~f~S~~~~y 232 (805)
T Consensus 121 F~~Iys~~~n~efhVkVsy~EIY 143 (607)
T KOG0240 121 FDHIYSMEENLEFHVKVSYFEIY 143 (607)
T ss_pred HHHHHCCCCCCEEEEEEEEEHHH
T ss_conf 99986276563699999852124