HHsearch alignment for GI: 254780991 and conserved domain: KOG0242

Probab=96.02  E-value=0.015  Score=37.57  Aligned_cols=85  Identities=24%  Similarity=0.387  Sum_probs=55.3

Q ss_pred             CCEEEEECCCCCCCHHHHHHH----HHHHHHCCCCE-EEEEEECCCCHHHHHHHHHHHCCCCEEEEECCHHHH-HHHHHH
Q ss_conf             754775188888843899999----99988739733-799863376469999999997199789993163468-999999
Q gi|254780991|r  139 TFFQMQTDYHPSGDQPAAIAQ----LLKGIHSREKV-QLLLGVTGSGKTFTMAKVIEAMQRPAIVMAPNKILA-AQLYSE  212 (805)
Q Consensus       139 ~~f~l~~~~~P~gdQ~~Ai~~----L~~~l~~g~~~-qlL~GVTGSGKTevya~lI~~~gr~aLvLvPei~La-~QL~~r  212 (805)
T Consensus        53 ~~y~FD~VF~~~~t~~~VYe~~tkpiv~~~l~G~N~TVFAYG~TgSGKTyTM~G~~~~---PGii-----~la~~dif~~  124 (675)
T KOG0242          53 EKYEFDRVFGEESTQEDVYERTTKPLLLSVLEGFNATVFAYGQTGSGKTYTMSGSEDD---PGII-----PLAMKDIFEK  124 (675)
T ss_pred             CCEEEEEECCCCCCHHHHHHHCCHHHHHHHHCCCCCCEEEECCCCCCCCEEEECCCCC---CCEE-----EHHHHHHHHH
T ss_conf             4125200448998878898740078899974686652564237889875477515788---9733-----4589999999


Q ss_pred             HHHHCCCCEEEEEEECCCCC
Q ss_conf             99867898389986213444
Q gi|254780991|r  213 FKNFFPHNAVEYFVSYYDYY  232 (805)
Q Consensus       213 fk~~Fp~n~V~~f~S~~~~y  232 (805)
T Consensus       125 I~~-~~~r~f~v~vSYlEIY  143 (675)
T KOG0242         125 IDK-SGEREFSVRVSYLEIY  143 (675)
T ss_pred             HHH-CCCCEEEEEEEEEEEE
T ss_conf             873-6774068887888885