HHsearch alignment for GI: 254780991 and conserved domain: KOG0948
>KOG0948 consensus.
Probab=99.15 E-value=1.4e-08 Score=82.86 Aligned_cols=115 Identities=23% Similarity=0.288 Sum_probs=79.5
Q ss_pred CCEEEEECCCCCCCHHHHHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHHHHC---CCCEEEEECCHHHHHHHHHHHHH
Q ss_conf 754775188888843899999999887397337998633764699999999971---99789993163468999999998
Q gi|254780991|r 139 TFFQMQTDYHPSGDQPAAIAQLLKGIHSREKVQLLLGVTGSGKTFTMAKVIEAM---QRPAIVMAPNKILAAQLYSEFKN 215 (805)
Q Consensus 139 ~~f~l~~~~~P~gdQ~~Ai~~L~~~l~~g~~~qlL~GVTGSGKTevya~lI~~~---gr~aLvLvPei~La~QL~~rfk~ 215 (805)
T Consensus 126 YPF~LDpF------Q~~aI~Ci----dr~-eSVLVSAHTSAGKTVVAeYAIA~sLr~kQRVIYTSPIKALSNQKYREl~~ 194 (1041)
T KOG0948 126 YPFTLDPF------QSTAIKCI----DRG-ESVLVSAHTSAGKTVVAEYAIAMSLREKQRVIYTSPIKALSNQKYRELLE 194 (1041)
T ss_pred CCCCCCCH------HHHHHHHH----CCC-CEEEEEEECCCCCCHHHHHHHHHHHHHCCEEEEECHHHHHCCHHHHHHHH
T ss_conf 88434806------76545311----279-63899840578852379999999987648589607315541154899998
Q ss_pred HCCCCEEEEEEECCCCCCCCCCCCCCCCCHHHHCCCCHHHHHHHHHHHHHHHCCCCEEEECC---HHHHCCCCCHHHHHC
Q ss_conf 67898389986213444421015554321022103588999999999999854998499827---789616898347722
Q gi|254780991|r 216 FFPHNAVEYFVSYYDYYQPEAYVPRTDTYIEKESSINEQIDRMRHSATRSLLERNDCIVVSS---VSCIYGIGSVESYSQ 292 (805)
Q Consensus 216 ~Fp~n~V~~f~S~~~~yqpEay~p~~d~~i~k~~s~n~~i~~~R~~a~~~l~~~~~~IVVgs---rSAIfgl~~P~~~lg 292 (805)
T Consensus 195 EF~D--VGLMTG--------------------DVTInP---------------~ASCLVMTTEILRsMLYRGSEvmrEVa 237 (1041)
T KOG0948 195 EFKD--VGLMTG--------------------DVTINP---------------DASCLVMTTEILRSMLYRGSEVMREVA 237 (1041)
T ss_pred HHCC--CCEEEC--------------------CEEECC---------------CCCEEEEHHHHHHHHHHCCCHHHHEEE
T ss_conf 8463--652305--------------------446689---------------875453379999998743316755231
Q ss_pred CEEEEECCC
Q ss_conf 579994198
Q gi|254780991|r 293 MIVQLKIGD 301 (805)
Q Consensus 293 lIIvdEehd 301 (805)
T Consensus 238 WVIFDEIHY 246 (1041)
T KOG0948 238 WVIFDEIHY 246 (1041)
T ss_pred EEEEEEEHH
T ss_conf 488620010