HHsearch alignment for GI: 254780991 and conserved domain: PRK00411

Probab=96.80  E-value=0.023  Score=36.19  Aligned_cols=97  Identities=22%  Similarity=0.268  Sum_probs=59.7

Q ss_pred             HHHHHHCCCHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHCCC--CEEEEEEECCCCHHH
Q ss_conf             999987396032057402666788874215887754775188888843899999999887397--337998633764699
Q gi|254780991|r  106 LARLIQSDNPLLKNGKIWTPHRSWSINNHSKDITFFQMQTDYHPSGDQPAAIAQLLKGIHSRE--KVQLLLGVTGSGKTF  183 (805)
Q Consensus       106 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~l~~~~~P~gdQ~~Ai~~L~~~l~~g~--~~qlL~GVTGSGKTe  183 (805)
T Consensus         6 ~~~~~~~~~~if~~~~~L~~~yvP~---~l~~Re------------~Ei~~l~~~l~~~l~g~~~~n~~I~G~pGTGKT~   70 (394)
T PRK00411          6 FEDLLMWDETIFKNEEVLEPDYVPE---NLPHRE------------EQIEELAFALRPALRGSRPSNVLILGPPGTGKTT   70 (394)
T ss_pred             HHHHHCCCCCEECCHHHCCCCCCCC---CCCCHH------------HHHHHHHHHHHHHHCCCCCCCEEEECCCCCCHHH
T ss_conf             9998647886156763379988899---898859------------9999999999999759999847998899998999


Q ss_pred             HHHHHHHHCCCC------EEEEECCHHHHHHHHHHHHHHC
Q ss_conf             999999971997------8999316346899999999867
Q gi|254780991|r  184 TMAKVIEAMQRP------AIVMAPNKILAAQLYSEFKNFF  217 (805)
Q Consensus       184 vya~lI~~~gr~------aLvLvPei~La~QL~~rfk~~F  217 (805)
T Consensus        71 ~vk~v~~~l~~~~~~~~~vyINc~~~~t~~~i~~~i~~~L  110 (394)
T PRK00411         71 TVKKVFEELEEAALKVVYVYINCQIDRTRYAILSEIARSL  110 (394)
T ss_pred             HHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHH
T ss_conf             9999999999746896599996966898999999999995