HHsearch alignment for GI: 254780991 and conserved domain: PRK04195
>PRK04195 replication factor C large subunit; Provisional.
Probab=90.66 E-value=1.1 Score=23.59 Aligned_cols=43 Identities=28% Similarity=0.241 Sum_probs=30.1
Q ss_pred HHHHHHHHHHHHH---CCC---CEEEEEEECCCCHHHHHHHHHHHCCCC
Q ss_conf 3899999999887---397---337998633764699999999971997
Q gi|254780991|r 153 QPAAIAQLLKGIH---SRE---KVQLLLGVTGSGKTFTMAKVIEAMQRP 195 (805)
Q Consensus 153 Q~~Ai~~L~~~l~---~g~---~~qlL~GVTGSGKTevya~lI~~~gr~ 195 (805)
T Consensus 19 ~~~~v~~l~~Wl~~w~~g~~~~k~lLL~GPpGvGKTT~a~~lAk~~g~~ 67 (403)
T PRK04195 19 NEKAKKQLREWIESWLKGKPPKKALLLYGPPGVGKTSLAHALANDYGWE 67 (403)
T ss_pred CHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHHHHHCCC
T ss_conf 8999999999999987399657469988939987999999999984998