HHsearch alignment for GI: 254780991 and conserved domain: PRK06526

>PRK06526 transposase; Provisional.
Probab=91.19  E-value=1.1  Score=23.60  Aligned_cols=61  Identities=20%  Similarity=0.187  Sum_probs=43.6

Q ss_pred             HHHHHHHHHHH--HHCCCCEEEEEEECCCCHHHHHHHHHH---HCCCCEEEEECCHHHHHHHHHHHHHHCCC
Q ss_conf             38999999998--873973379986337646999999999---71997899931634689999999986789
Q gi|254780991|r  153 QPAAIAQLLKG--IHSREKVQLLLGVTGSGKTFTMAKVIE---AMQRPAIVMAPNKILAAQLYSEFKNFFPH  219 (805)
Q Consensus       153 Q~~Ai~~L~~~--l~~g~~~qlL~GVTGSGKTevya~lI~---~~gr~aLvLvPei~La~QL~~rfk~~Fp~  219 (805)
T Consensus        82 ~~~~i~~La~~~fi~~~-~Nvil~G~~GtGKThLA~Alg~~A~~~G~~v~f~-----~~~~L~~~L~~a~~~  147 (254)
T PRK06526         82 KRDTIAHLGTLDFVTGK-ENVVFLGPPGTGKTHLAIGLGIRACQAGHRVLFA-----TAAQWVARLAAAHHA  147 (254)
T ss_pred             CHHHHHHHHCCCHHHCC-CCEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEE-----EHHHHHHHHHHHHHC
T ss_conf             99999998637177658-8789989999868999999999999869967998-----779999999998855