HHsearch alignment for GI: 254780991 and conserved domain: PRK06526
>PRK06526 transposase; Provisional.
Probab=91.19 E-value=1.1 Score=23.60 Aligned_cols=61 Identities=20% Similarity=0.187 Sum_probs=43.6
Q ss_pred HHHHHHHHHHH--HHCCCCEEEEEEECCCCHHHHHHHHHH---HCCCCEEEEECCHHHHHHHHHHHHHHCCC
Q ss_conf 38999999998--873973379986337646999999999---71997899931634689999999986789
Q gi|254780991|r 153 QPAAIAQLLKG--IHSREKVQLLLGVTGSGKTFTMAKVIE---AMQRPAIVMAPNKILAAQLYSEFKNFFPH 219 (805)
Q Consensus 153 Q~~Ai~~L~~~--l~~g~~~qlL~GVTGSGKTevya~lI~---~~gr~aLvLvPei~La~QL~~rfk~~Fp~ 219 (805)
T Consensus 82 ~~~~i~~La~~~fi~~~-~Nvil~G~~GtGKThLA~Alg~~A~~~G~~v~f~-----~~~~L~~~L~~a~~~ 147 (254)
T PRK06526 82 KRDTIAHLGTLDFVTGK-ENVVFLGPPGTGKTHLAIGLGIRACQAGHRVLFA-----TAAQWVARLAAAHHA 147 (254)
T ss_pred CHHHHHHHHCCCHHHCC-CCEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEE-----EHHHHHHHHHHHHHC
T ss_conf 99999998637177658-8789989999868999999999999869967998-----779999999998855