HHsearch alignment for GI: 254780991 and conserved domain: PRK08939
>PRK08939 primosomal protein DnaI; Reviewed.
Probab=95.99 E-value=0.061 Score=33.09 Aligned_cols=63 Identities=22% Similarity=0.297 Sum_probs=46.3
Q ss_pred HHHHHHHHHH---HHHCCC--CEEEEEEECCCCHHHHHHHHHHH---CCCCEEEEECCHHHHHHHHHHHHHHCCCC
Q ss_conf 3899999999---887397--33799863376469999999997---19978999316346899999999867898
Q gi|254780991|r 153 QPAAIAQLLK---GIHSRE--KVQLLLGVTGSGKTFTMAKVIEA---MQRPAIVMAPNKILAAQLYSEFKNFFPHN 220 (805)
Q Consensus 153 Q~~Ai~~L~~---~l~~g~--~~qlL~GVTGSGKTevya~lI~~---~gr~aLvLvPei~La~QL~~rfk~~Fp~n 220 (805)
T Consensus 137 R~~a~~~a~~F~~~y~~~~~~kGlyl~G~~G~GKTyL~~aian~La~~g~~v~~v~-----~p~~~~~lK~s~~d~ 207 (306)
T PRK08939 137 RLDALMAALDFLEAYKPGEKVKGLYLYGDFGVGKTYLLAAIANELAKKGVSSTLVH-----FPEFIRELKNAISDG 207 (306)
T ss_pred HHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHCCCEEEEEE-----HHHHHHHHHHHHCCC
T ss_conf 99999999999997376988877889899999899999999999998699299987-----599999999986489