HHsearch alignment for GI: 254780991 and conserved domain: PRK09183

>PRK09183 transposase/IS protein; Provisional.
Probab=91.63  E-value=0.68  Score=25.25  Aligned_cols=61  Identities=20%  Similarity=0.144  Sum_probs=43.4

Q ss_pred             HHHHHHHHHHH--HHCCCCEEEEEEECCCCHHHHHHHHHH---HCCCCEEEEECCHHHHHHHHHHHHHHCCC
Q ss_conf             38999999998--873973379986337646999999999---71997899931634689999999986789
Q gi|254780991|r  153 QPAAIAQLLKG--IHSREKVQLLLGVTGSGKTFTMAKVIE---AMQRPAIVMAPNKILAAQLYSEFKNFFPH  219 (805)
Q Consensus       153 Q~~Ai~~L~~~--l~~g~~~qlL~GVTGSGKTevya~lI~---~~gr~aLvLvPei~La~QL~~rfk~~Fp~  219 (805)
T Consensus        85 ~~~~i~~La~~~fi~~~-~Nvil~G~~GtGKThLA~Alg~~A~~~G~~v~f~~-----~~~L~~~L~~a~~~  150 (258)
T PRK09183         85 PQKQLQSLRSLSFIERN-ENIVLLGPSGVGKTHLAIALGYEAVRAGIKVRFTT-----AADLLLQLSTAQRQ  150 (258)
T ss_pred             CHHHHHHHHCCCHHHCC-CCEEEECCCCCCHHHHHHHHHHHHHHCCCEEEEEE-----HHHHHHHHHHHHHC
T ss_conf             38999988258166558-86799899998689999999999998799399978-----99999999999876