HHsearch alignment for GI: 254780991 and conserved domain: PRK09401

>PRK09401 reverse gyrase; Reviewed.
Probab=99.45  E-value=3.9e-10  Score=94.48  Aligned_cols=132  Identities=17%  Similarity=0.192  Sum_probs=93.4

Q ss_pred             CEEEEECCCCCCCHHHHHHHHHHHHHCCCCEEEEEEECCCCHHHH---HHHHHHHCCCCEEEEECCHHHHHHHHHHHHHH
Q ss_conf             547751888888438999999998873973379986337646999---99999971997899931634689999999986
Q gi|254780991|r  140 FFQMQTDYHPSGDQPAAIAQLLKGIHSREKVQLLLGVTGSGKTFT---MAKVIEAMQRPAIVMAPNKILAAQLYSEFKNF  216 (805)
Q Consensus       140 ~f~l~~~~~P~gdQ~~Ai~~L~~~l~~g~~~qlL~GVTGSGKTev---ya~lI~~~gr~aLvLvPei~La~QL~~rfk~~  216 (805)
T Consensus        70 fF~~~~G~~~w~~Qr~WakR~~~----g-~SFaiiAPTG~GKTtfgl~~sly~a~kgkks~~i~PT~~Lv~Q~~~kl~~~  144 (1176)
T PRK09401         70 FFKKKVGSEPWSLQRTWAKRLLL----G-ESFAIIAPTGVGKTTFGLVMALYLAKKGKKSYIIFPTRLLVEQVVEKLRKL  144 (1176)
T ss_pred             HHHHHHCCCCCHHHHHHHHHHHC----C-CCEEEECCCCCCHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHH
T ss_conf             99998689984889999999866----8-974898889988889999999999865983999968889999999999999


Q ss_pred             C---CC-CEEEEEEECCCCCCCCCCCCCCCCCHHHHCCCCHHHHHHHHHHHHHHHCCCCEEEECCHHHHCCCC--CHHHH
Q ss_conf             7---89-838998621344442101555432102210358899999999999985499849982778961689--83477
Q gi|254780991|r  217 F---PH-NAVEYFVSYYDYYQPEAYVPRTDTYIEKESSINEQIDRMRHSATRSLLERNDCIVVSSVSCIYGIG--SVESY  290 (805)
Q Consensus       217 F---p~-n~V~~f~S~~~~yqpEay~p~~d~~i~k~~s~n~~i~~~R~~a~~~l~~~~~~IVVgsrSAIfgl~--~P~~~  290 (805)
T Consensus       145 ~~~~~~~~~~~~y~~~~~-------------------------~~~kee~~~~~~~gdfdIlitT~~fl~kn~~~l~~~~  199 (1176)
T PRK09401        145 AEKVGVKVRLLYYHSSLK-------------------------KKEKEEFLERLEEGDFDILVTTSQFLSKNFDELPKDR  199 (1176)
T ss_pred             HHHHCCCCEEEEEECCCC-------------------------HHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHCCCCC
T ss_conf             997099840899856776-------------------------6678999988655998689985676765487603568


Q ss_pred             HCCEEEEECCC
Q ss_conf             22579994198
Q gi|254780991|r  291 SQMIVQLKIGD  301 (805)
Q Consensus       291 lglIIvdEehd  301 (805)
T Consensus       200 f~fifvDDVDs  210 (1176)
T PRK09401        200 FDFVFVDDVDA  210 (1176)
T ss_pred             CCEEEEECHHH
T ss_conf             88899934187