HHsearch alignment for GI: 254780991 and conserved domain: PRK09401
>PRK09401 reverse gyrase; Reviewed.
Probab=99.45 E-value=3.9e-10 Score=94.48 Aligned_cols=132 Identities=17% Similarity=0.192 Sum_probs=93.4
Q ss_pred CEEEEECCCCCCCHHHHHHHHHHHHHCCCCEEEEEEECCCCHHHH---HHHHHHHCCCCEEEEECCHHHHHHHHHHHHHH
Q ss_conf 547751888888438999999998873973379986337646999---99999971997899931634689999999986
Q gi|254780991|r 140 FFQMQTDYHPSGDQPAAIAQLLKGIHSREKVQLLLGVTGSGKTFT---MAKVIEAMQRPAIVMAPNKILAAQLYSEFKNF 216 (805)
Q Consensus 140 ~f~l~~~~~P~gdQ~~Ai~~L~~~l~~g~~~qlL~GVTGSGKTev---ya~lI~~~gr~aLvLvPei~La~QL~~rfk~~ 216 (805)
T Consensus 70 fF~~~~G~~~w~~Qr~WakR~~~----g-~SFaiiAPTG~GKTtfgl~~sly~a~kgkks~~i~PT~~Lv~Q~~~kl~~~ 144 (1176)
T PRK09401 70 FFKKKVGSEPWSLQRTWAKRLLL----G-ESFAIIAPTGVGKTTFGLVMALYLAKKGKKSYIIFPTRLLVEQVVEKLRKL 144 (1176)
T ss_pred HHHHHHCCCCCHHHHHHHHHHHC----C-CCEEEECCCCCCHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHH
T ss_conf 99998689984889999999866----8-974898889988889999999999865983999968889999999999999
Q ss_pred C---CC-CEEEEEEECCCCCCCCCCCCCCCCCHHHHCCCCHHHHHHHHHHHHHHHCCCCEEEECCHHHHCCCC--CHHHH
Q ss_conf 7---89-838998621344442101555432102210358899999999999985499849982778961689--83477
Q gi|254780991|r 217 F---PH-NAVEYFVSYYDYYQPEAYVPRTDTYIEKESSINEQIDRMRHSATRSLLERNDCIVVSSVSCIYGIG--SVESY 290 (805)
Q Consensus 217 F---p~-n~V~~f~S~~~~yqpEay~p~~d~~i~k~~s~n~~i~~~R~~a~~~l~~~~~~IVVgsrSAIfgl~--~P~~~ 290 (805)
T Consensus 145 ~~~~~~~~~~~~y~~~~~-------------------------~~~kee~~~~~~~gdfdIlitT~~fl~kn~~~l~~~~ 199 (1176)
T PRK09401 145 AEKVGVKVRLLYYHSSLK-------------------------KKEKEEFLERLEEGDFDILVTTSQFLSKNFDELPKDR 199 (1176)
T ss_pred HHHHCCCCEEEEEECCCC-------------------------HHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHCCCCC
T ss_conf 997099840899856776-------------------------6678999988655998689985676765487603568
Q ss_pred HCCEEEEECCC
Q ss_conf 22579994198
Q gi|254780991|r 291 SQMIVQLKIGD 301 (805)
Q Consensus 291 lglIIvdEehd 301 (805)
T Consensus 200 f~fifvDDVDs 210 (1176)
T PRK09401 200 FDFVFVDDVDA 210 (1176)
T ss_pred CCEEEEECHHH
T ss_conf 88899934187