HHsearch alignment for GI: 254780991 and conserved domain: PRK10436

Probab=96.34  E-value=0.037  Score=34.68  Aligned_cols=89  Identities=27%  Similarity=0.386  Sum_probs=49.7

Q ss_pred             HHHHHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHHHHC---CCCEEEEECCHHHHHHHHHHHHHHCCCCEEEEEEECC
Q ss_conf             3899999999887397337998633764699999999971---9978999316346899999999867898389986213
Q gi|254780991|r  153 QPAAIAQLLKGIHSREKVQLLLGVTGSGKTFTMAKVIEAM---QRPAIVMAPNKILAAQLYSEFKNFFPHNAVEYFVSYY  229 (805)
Q Consensus       153 Q~~Ai~~L~~~l~~g~~~qlL~GVTGSGKTevya~lI~~~---gr~aLvLvPei~La~QL~~rfk~~Fp~n~V~~f~S~~  229 (805)
T Consensus       200 ~~~~~~~~~~~~~~p~GliLvtGPTGSGKTTTLya~L~~l~~~~~~I~Ti-------------------EDPVE~~l~gi  260 (461)
T PRK10436        200 TPAQLAQFRQALQQPQGLVLVTGPTGSGKTVTLYSALQTLNTAQINICSV-------------------EDPVEIPLAGI  260 (461)
T ss_pred             CHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCEEEEE-------------------ECCCCCCCCCC
T ss_conf             99999999999838997799978999956999999997434677169996-------------------07743554675


Q ss_pred             CCCCCCCCCCCCCCCHHHHCCCCHHHHHHHHHHHHHHHC-CCCEEEECC
Q ss_conf             444421015554321022103588999999999999854-998499827
Q gi|254780991|r  230 DYYQPEAYVPRTDTYIEKESSINEQIDRMRHSATRSLLE-RNDCIVVSS  277 (805)
Q Consensus       230 ~~yqpEay~p~~d~~i~k~~s~n~~i~~~R~~a~~~l~~-~~~~IVVgs  277 (805)
T Consensus       261 ~--Q---------------~~vn~~~g~tfa~~lrs~LRqDPDVImvGE  292 (461)
T PRK10436        261 N--Q---------------TQIHPRAGLTFQRVLRALLRQDPDVIMVGE  292 (461)
T ss_pred             C--C---------------CEECCCCCHHHHHHHHHHHCCCCCEEEECC
T ss_conf             4--5---------------231322131399999998746999998657