HHsearch alignment for GI: 254780991 and conserved domain: PRK10590

>PRK10590 ATP-dependent RNA helicase RhlE; Provisional.
Probab=100.00  E-value=3.9e-31  Score=251.78  Aligned_cols=124  Identities=22%  Similarity=0.315  Sum_probs=115.0

Q ss_pred             CCCCCCCCHHHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHHHCCCCCEEEEHHHHHCCCCCCCCCEEEEECCCC
Q ss_conf             32124662147899999999863596687325764578999999997318986999845875357877711799962885
Q gi|254780991|r  582 GLRILLTVLTKRMAEDLTEYLYERNIRVRYMHSEVKTLERIEIIRDLRLGKFDVLVGINLLREGLDIPECGLVAILDADK  661 (805)
Q Consensus       582 ~~R~l~~~~tkr~~e~l~~~~~~~~i~~~~~h~~~~~~~r~~il~~~~~g~~diLvgt~~~akGlD~p~v~lV~i~dAD~  661 (805)
T Consensus       245 ~~~~iIF~~tk~~a~~l~~~L~~~g~~~~~lHg~~sq~~R~~~l~~F~~g~~~vLVaTDvaaRGiDi~~V~~VInyD---  321 (457)
T PRK10590        245 WQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLVATDIAARGLDIEELPHVVNYE---  321 (457)
T ss_pred             CCCEEEEECHHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCEEEEEC---
T ss_conf             66335884119999999999855699823232478999999999999869982999577011556635688799938---


Q ss_pred             CCCCCCHHHHHHHHHHHCC-CCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHH
Q ss_conf             6744460137766543127-998669998248988999999987888888887
Q gi|254780991|r  662 EGFLRSKTSLIQTIGRAAR-NVNSKVILYADTITKSIQLAIDETTRRREKQLE  713 (805)
Q Consensus       662 ~~f~~~~~~~~q~~GRagR-~~~G~~il~ad~~t~~~~~ai~e~~rrr~~q~~  713 (805)
T Consensus       322 --~P~~~e~YvHRiGRTGRaG~~G~ait~---v~~~e~~~~~~ie~~~~~~~~  369 (457)
T PRK10590        322 --LPNVPEDYVHRIGRTGRAAATGEALSL---VCVDEHKLLRDIEKLLKKEIP  369 (457)
T ss_pred             --CCCCHHHEECCCCCCCCCCCCEEEEEE---ECHHHHHHHHHHHHHHCCCCC
T ss_conf             --999744500226706058995369998---668999999999999779887