HHsearch alignment for GI: 254780991 and conserved domain: PRK11057
>PRK11057 ATP-dependent DNA helicase RecQ; Provisional.
Probab=99.93 E-value=2.9e-22 Score=185.25 Aligned_cols=324 Identities=13% Similarity=0.153 Sum_probs=216.7
Q ss_pred ECCCCCCCHHHHHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHCCCCEEEE
Q ss_conf 18888884389999999988739733799863376469999999997199789993163468999999998678983899
Q gi|254780991|r 145 TDYHPSGDQPAAIAQLLKGIHSREKVQLLLGVTGSGKTFTMAKVIEAMQRPAIVMAPNKILAAQLYSEFKNFFPHNAVEY 224 (805)
Q Consensus 145 ~~~~P~gdQ~~Ai~~L~~~l~~g~~~qlL~GVTGSGKTevya~lI~~~gr~aLvLvPei~La~QL~~rfk~~Fp~n~V~~ 224 (805)
T Consensus 24 ~~Fr~~--Q~e~i~~~l~----g-~D~l~~mpTG~GKSlcyQlPal~~~g~tiVisPLisLm~DQv~~L~~~-gi-~a~~ 94 (607)
T PRK11057 24 QQFRPG--QEEIIDTVLS----G-RDCLVVMPTGGGKSLCYQIPALVLDGLTLVVSPLISLMKDQVDQLLAN-GV-AAAC 94 (607)
T ss_pred CCCCHH--HHHHHHHHHC----C-CCEEEECCCCCHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHHC-CC-CEEE
T ss_conf 434576--9999999986----9-988998789955979999999877998899868799999999999978-99-2999
Q ss_pred EEECCCCCCCCCCCCCCCCCHHHHCCCCHHHHHHHHHHHHHHHCCCCEEEECCHHHHC----CCCCHHHHHCCEEEEECC
Q ss_conf 8621344442101555432102210358899999999999985499849982778961----689834772257999419
Q gi|254780991|r 225 FVSYYDYYQPEAYVPRTDTYIEKESSINEQIDRMRHSATRSLLERNDCIVVSSVSCIY----GIGSVESYSQMIVQLKIG 300 (805)
Q Consensus 225 f~S~~~~yqpEay~p~~d~~i~k~~s~n~~i~~~R~~a~~~l~~~~~~IVVgsrSAIf----gl~~P~~~lglIIvdEeh 300 (805)
T Consensus 95 l~s~~~-------------------------~~e~~~~~~~~~~g~~~llyvtPErl~~~~~~~~l~~~~i~~~viDEAH 149 (607)
T PRK11057 95 LNSTQT-------------------------REQQLEVMAGCRTGQIKLLYIAPERLMMDNFLEHLAHWNPVLLAVDEAH 149 (607)
T ss_pred ECCCCC-------------------------HHHHHHHHHHHHCCCCCEEEECHHHHCCHHHHHHHHHCCCCEEEEEHHH
T ss_conf 569999-------------------------9999999999975998799988558569789999971886648853066
Q ss_pred CCCCHHHHHHHHHHCCCCCCHHHHHHHHHCCCCEEEECCCCCHHHHHHHHCCCCCCHHHHHCCCCCCCCHHHHCCCCCCH
Q ss_conf 81117875323431176563387754533187247831788877888731044420022210166640011100001000
Q gi|254780991|r 301 DSVEQKELLSSLVKQQYKRQDIGIIRGTFRVCGDSIEIFPSHLEDVAWRVSMFGNDIEEISEFYPLTGQKIRNVETIKIY 380 (805)
Q Consensus 301 d~~~~~~~~~~l~~~~Y~R~D~a~~RG~f~~rg~ILdsatps~Es~~~Rie~f~deIe~I~~fDplT~~~~~~~~~~~i~ 380 (805)
T Consensus 150 cvs~WGhdFRp~----Y~--~l~~l~~~~~~~p~~AlTATAt~~v----------------------------------- 188 (607)
T PRK11057 150 CISQWGHDFRPE----YA--ALGQLRQRFPTLPFMALTATADDTT----------------------------------- 188 (607)
T ss_pred HHHHCCCCCHHH----HH--HHHHHHHHCCCCCEEEEEECCCHHH-----------------------------------
T ss_conf 675415500388----99--9999999769997489996368789-----------------------------------
Q ss_pred HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCCCCCCHH
Q ss_conf 00000256367887545589989989988754433211001244447777533211201451011333114465556202
Q gi|254780991|r 381 ANSHYVTPRPTLNTAMKYIKEELKMRLIELEKEGRLLEAQRLEQRITYDLEMLETTGSCQSIENYSRYLTGRNPGEPPPT 460 (805)
Q Consensus 381 Pa~~~v~~~e~l~~a~~~i~~el~~rl~~~~~~~~~~ea~rL~qR~~~dle~l~e~G~~~gienyS~~L~~r~~ge~P~t 460 (805)
T Consensus 189 -------------------~~di~~~L---------------------------------~l~~~--~~~~~~-f~RpNl 213 (607)
T PRK11057 189 -------------------RQDIVRLL---------------------------------GLNDP--LIQISS-FDRPNI 213 (607)
T ss_pred -------------------HHHHHHHH---------------------------------CCCCC--CEEECC-CCCCCC
T ss_conf -------------------99999970---------------------------------89998--078257-788874
Q ss_pred HHHCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCHHH
Q ss_conf 33026544213210123447544543245654133323576655444322211101001215554544468675420132
Q gi|254780991|r 461 LFEYIPEDSLLFVDESHVTIPQISGMYRGDFHRKATLAEYGFRLPSCMDNRPLRFEEWNCLRPTTIVVSATPGSWELEQC 540 (805)
Q Consensus 461 L~dY~p~d~ll~idesh~~~pqi~~~~~~d~~RK~~l~~~gfrlp~~~~n~pl~f~e~~~~~~~~~~~satPg~~e~e~~ 540 (805)
T Consensus 214 ~~------------------------------------------------------------------------------ 215 (607)
T PRK11057 214 RY------------------------------------------------------------------------------ 215 (607)
T ss_pred EE------------------------------------------------------------------------------
T ss_conf 14------------------------------------------------------------------------------
Q ss_pred HHHHHHHHHCCCCCCCCCCEECCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCEEEECCCCCCHHH
Q ss_conf 20023432012446772000013310168899999986302321246621478999999998635966873257645789
Q gi|254780991|r 541 QGIIVEQIIRPTGLVDPPVEIRSARTQVEDVYDEINLAAQQGLRILLTVLTKRMAEDLTEYLYERNIRVRYMHSEVKTLE 620 (805)
Q Consensus 541 ~~~~~eqi~rptg~idp~ieir~~~~qvddl~~ei~~~~~~~~R~l~~~~tkr~~e~l~~~~~~~~i~~~~~h~~~~~~~ 620 (805)
T Consensus 216 -------------------~v~~~~~~~~~~~~~~~~~--~~~sgIIYc~trk~~e~la~~L~~~G~~~~~YHagl~~~~ 274 (607)
T PRK11057 216 -------------------MLMEKFKPLDQLMRYVQEQ--RGKSGIIYCNSRAKVEDTAARLQSRGISAAAYHAGLDNDV 274 (607)
T ss_pred -------------------EEEECCCHHHHHHHHHHHC--CCCCEEEEECCHHHHHHHHHHHHHCCCCEEECCCCCCHHH
T ss_conf -------------------5554477399999998706--8997799969289999999999857975453058999789
Q ss_pred HHHHHHHHHCCCCCEEEEHHHHHCCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHCC-CCCCEEEEEECCCCHH-HH
Q ss_conf 999999973189869998458753578777117999628856744460137766543127-9986699982489889-99
Q gi|254780991|r 621 RIEIIRDLRLGKFDVLVGINLLREGLDIPECGLVAILDADKEGFLRSKTSLIQTIGRAAR-NVNSKVILYADTITKS-IQ 698 (805)
Q Consensus 621 r~~il~~~~~g~~diLvgt~~~akGlD~p~v~lV~i~dAD~~~f~~~~~~~~q~~GRagR-~~~G~~il~ad~~t~~-~~ 698 (805)
T Consensus 275 R~~~q~~f~~~~~~vivAT~AFGMGIdk~dVR~ViH~~-----~P~s~e~yyQE~GRAGRDG~~a~c~l~y~~~D~~~~~ 349 (607)
T PRK11057 275 RADVQEAFQRDDLQIVVATVAFGMGINKPNVRFVVHFD-----IPRNIESYYQETGRAGRDGLPAEAMLFYDPADMAWLR 349 (607)
T ss_pred HHHHHHHHHCCCCCEEEEEHHHHCCCCCCCCCEEEECC-----CCCCHHHHHHHHHHCCCCCCCCEEEEEECHHHHHHHH
T ss_conf 99999987568875899750110576777766799778-----9999999999886352589854189985687899999
Q ss_pred HHHH
Q ss_conf 9999
Q gi|254780991|r 699 LAID 702 (805)
Q Consensus 699 ~ai~ 702 (805)
T Consensus 350 ~~i~ 353 (607)
T PRK11057 350 RCLE 353 (607)
T ss_pred HHHH
T ss_conf 9985