HHsearch alignment for GI: 254780991 and conserved domain: PRK12323

Probab=91.45  E-value=0.51  Score=26.18  Aligned_cols=110  Identities=18%  Similarity=0.273  Sum_probs=61.4

Q ss_pred             HHHHHHHHHHHHHCCC--CEEEEEEECCCCHHHHHHHHHHHC-CCCEEEEECCHHHHHHHH---HHHHHHCCCCEEEEEE
Q ss_conf             3899999999887397--337998633764699999999971-997899931634689999---9999867898389986
Q gi|254780991|r  153 QPAAIAQLLKGIHSRE--KVQLLLGVTGSGKTFTMAKVIEAM-QRPAIVMAPNKILAAQLY---SEFKNFFPHNAVEYFV  226 (805)
Q Consensus       153 Q~~Ai~~L~~~l~~g~--~~qlL~GVTGSGKTevya~lI~~~-gr~aLvLvPei~La~QL~---~rfk~~Fp~n~V~~f~  226 (805)
T Consensus        21 Q~~v~~~l~na~~~~r~~haylf~G~rGvGKTt-~ari~Ak~lnc~~--~~~~~g~~~~pcg~C~~C~~i~~g~~~----   93 (721)
T PRK12323         21 QEHVVRALTHALEQQRLHHAYLFTGTRGVGKTT-LSRILAKSLNCTG--PDGEGGITAQPCGQCRACTEIDAGRFV----   93 (721)
T ss_pred             CHHHHHHHHHHHHCCCCCCEEEEECCCCCCHHH-HHHHHHHHHCCCC--CCCCCCCCCCCCCCCHHHHHHHCCCCC----
T ss_conf             599999999999719975447502799888989-9999999976899--866789878878776546877568987----


Q ss_pred             ECCCCCCCCCCCCCCCCCHHHHCCCCHHHHHHHHHHHHHHHCCCCEEEECCHHHHCCCCCHHH-HHCCEEEEECCCCC
Q ss_conf             213444421015554321022103588999999999999854998499827789616898347-72257999419811
Q gi|254780991|r  227 SYYDYYQPEAYVPRTDTYIEKESSINEQIDRMRHSATRSLLERNDCIVVSSVSCIYGIGSVES-YSQMIVQLKIGDSV  303 (805)
Q Consensus       227 S~~~~yqpEay~p~~d~~i~k~~s~n~~i~~~R~~a~~~l~~~~~~IVVgsrSAIfgl~~P~~-~lglIIvdEehd~~  303 (805)
T Consensus        94 ----------------d~~EiDaas~~~v~~~r-----~l~~~----------~~y---~P~~~~~KvyiiDevhmls  137 (721)
T PRK12323         94 ----------------DYIEMDAASNRGVDEMA-----QLLDQ----------AVY---APTAGRFKVYMIDEVHMLT  137 (721)
T ss_pred             ----------------CEEEEECCCCCCHHHHH-----HHHHH----------CCC---CCCCCCEEEEEEECCCCCC
T ss_conf             ----------------64774367678889999-----99985----------455---8876644699985400058