HHsearch alignment for GI: 254780991 and conserved domain: PRK12901
>PRK12901 secA preprotein translocase subunit SecA; Reviewed.
Probab=98.72 E-value=6.7e-07 Score=70.23 Aligned_cols=143 Identities=20% Similarity=0.238 Sum_probs=106.3
Q ss_pred CCCCCCCCC-CEECCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHH
Q ss_conf 124467720-0001331016889999998630232124662147899999999863596687325764578999999997
Q gi|254780991|r 550 RPTGLVDPP-VEIRSARTQVEDVYDEINLAAQQGLRILLTVLTKRMAEDLTEYLYERNIRVRYMHSEVKTLERIEIIRDL 628 (805)
Q Consensus 550 rptg~idp~-ieir~~~~qvddl~~ei~~~~~~~~R~l~~~~tkr~~e~l~~~~~~~~i~~~~~h~~~~~~~r~~il~~~ 628 (805)
T Consensus 599 ~P~~R~D~~D~iy~t~~~K~~Aii~ei~~~~~~GqPVLVGT~SVe~SE~lS~~L~~~gi~h~VLNAk~h~~EAeIIA~AG 678 (1111)
T PRK12901 599 RPIARKDKNDRVYKTKREKYNAVIEEIVELVEAGRPVLVGTTSVEISELLSRMLKMRKIPHNVLNAKLHQKEAEIVAEAG 678 (1111)
T ss_pred CCCEEEECCCEEECCHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHCCCHHHHHCCCCHHHHHHHHHHCC
T ss_conf 98656628883866999999999999999996499789971718889999999987787387737787799999998468
Q ss_pred HCCCCCEEEEHHHHHCCCCCCCCCEEEEECCC---CCCC--CCCHH-----HHHHHHHHHCC-CCCCEEEEEECCCCHHH
Q ss_conf 31898699984587535787771179996288---5674--44601-----37766543127-99866999824898899
Q gi|254780991|r 629 RLGKFDVLVGINLLREGLDIPECGLVAILDAD---KEGF--LRSKT-----SLIQTIGRAAR-NVNSKVILYADTITKSI 697 (805)
Q Consensus 629 ~~g~~diLvgt~~~akGlD~p~v~lV~i~dAD---~~~f--~~~~~-----~~~q~~GRagR-~~~G~~il~ad~~t~~~ 697 (805)
T Consensus 679 ~~Ga--VTIATNMAGRGTDIkL-------~~~v~~~GGL~VigTERheSrRIDnQLrGRsGRQGDPG~S~F~lSlEDdLm 749 (1111)
T PRK12901 679 QKGT--VTIATNMAGRGTDIKL-------SPEVKAAGGLAIIGTERHESRRVDRQLRGRAGRQGDPGSSQFFVSLEDDLM 749 (1111)
T ss_pred CCCC--EEEECCCCCCCCCCCC-------CHHHHHCCCCEEEECCCCHHHHHHHHHCCCCCCCCCCCCCEEEEECCHHHH
T ss_conf 9996--7972434578858253-------655786278277520323125677786043244689875426653117899
Q ss_pred HHHH
Q ss_conf 9999
Q gi|254780991|r 698 QLAI 701 (805)
Q Consensus 698 ~~ai 701 (805)
T Consensus 750 R~Fg 753 (1111)
T PRK12901 750 RLFG 753 (1111)
T ss_pred HHHC
T ss_conf 9864