HHsearch alignment for GI: 254780991 and conserved domain: PRK12906
>PRK12906 secA preprotein translocase subunit SecA; Reviewed.
Probab=98.70 E-value=2.7e-06 Score=65.64 Aligned_cols=138 Identities=18% Similarity=0.162 Sum_probs=102.3
Q ss_pred CEECCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHHHCCCCCEEEE
Q ss_conf 00013310168899999986302321246621478999999998635966873257645789999999973189869998
Q gi|254780991|r 559 VEIRSARTQVEDVYDEINLAAQQGLRILLTVLTKRMAEDLTEYLYERNIRVRYMHSEVKTLERIEIIRDLRLGKFDVLVG 638 (805)
Q Consensus 559 ieir~~~~qvddl~~ei~~~~~~~~R~l~~~~tkr~~e~l~~~~~~~~i~~~~~h~~~~~~~r~~il~~~~~g~~diLvg 638 (805)
T Consensus 417 ~iy~t~~~K~~Ai~~ei~~~~~~gqPvLvGT~SVe~SE~ls~~L~~~gi~h~vLNAk~~~~EA~IIa~AG~~Ga--VTIA 494 (823)
T PRK12906 417 LLYPTLDSKFNAVVDDIKERHAKGQPVLVGTVSIESSERLSQLLDKAGIPHAVLNAKNHAKEAEIIAQAGQRGA--VTIA 494 (823)
T ss_pred CCCCCHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHCCCCHHHHCCCCHHHHHHHHHHCCCCCE--EEEE
T ss_conf 46479999999999999999867998899717589999999999976870353068775789999983489993--8970
Q ss_pred HHHHHCCCCCCCCCEEEEECCC----------------------------CCCC-----C--CCHHHHHHHHHHHCC-CC
Q ss_conf 4587535787771179996288----------------------------5674-----4--460137766543127-99
Q gi|254780991|r 639 INLLREGLDIPECGLVAILDAD----------------------------KEGF-----L--RSKTSLIQTIGRAAR-NV 682 (805)
Q Consensus 639 t~~~akGlD~p~v~lV~i~dAD----------------------------~~~f-----~--~~~~~~~q~~GRagR-~~ 682 (805)
T Consensus 495 TNMAGRGTDI~L---Gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~~GGL~VIgTErheSrRIDnQLrGRaGRQGD 571 (823)
T PRK12906 495 TNMAGRGTDIKL---GGNPFEDIEAYQEAWIRELPKMKQRCEERRDKVRELGGLAVIGTERHESRRIDNQLRGRSGRQGD 571 (823)
T ss_pred CCCCCCCCCEEE---CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHCCCCCCCC
T ss_conf 655689879630---89730213433222466788888877655689997389379850444025678787232134799
Q ss_pred CCEEEEEECCCCHHHHHHH
Q ss_conf 8669998248988999999
Q gi|254780991|r 683 NSKVILYADTITKSIQLAI 701 (805)
Q Consensus 683 ~G~~il~ad~~t~~~~~ai 701 (805)
T Consensus 572 PGss~F~lSLEDdLmr~Fg 590 (823)
T PRK12906 572 PGSTRFYLSLEDDLMRRFG 590 (823)
T ss_pred CCCCEEEEECCHHHHHHHC
T ss_conf 9852376533469998747