HHsearch alignment for GI: 254780991 and conserved domain: PRK13700

>PRK13700 conjugal transfer protein TraD; Provisional.

Probab=93.08  E-value=0.14  Score=30.47  Aligned_cols=39  Identities=13%  Similarity=0.186  Sum_probs=31.4

Q ss_pred             CEEEEEEECCCCHHHHHHHHHHH---CCCCEEEEECCHHHHH
Q ss_conf             33799863376469999999997---1997899931634689
Q gi|254780991|r  169 KVQLLLGVTGSGKTFTMAKVIEA---MQRPAIVMAPNKILAA  207 (805)
Q Consensus       169 ~~qlL~GVTGSGKTevya~lI~~---~gr~aLvLvPei~La~  207 (805)
T Consensus       186 qH~li~GTtGtGKS~~ir~LL~qIR~RGdrAIIyD~~G~Fv~  227 (732)
T PRK13700        186 QNFCLHGTVGAGKSEVIRRLANYARQRGDMVVIYDRSGEFVK  227 (732)
T ss_pred             HEEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEECCCCCCHH
T ss_conf             126774688888999999999999972995899939985339