HHsearch alignment for GI: 254780991 and conserved domain: PRK13767
>PRK13767 ATP-dependent helicase; Provisional.
Probab=94.72 E-value=0.32 Score=27.65 Aligned_cols=121 Identities=17% Similarity=0.154 Sum_probs=77.7
Q ss_pred CCCCCHHHHHHHHHHHHHCCCCEEEEEEECCCCHHHHH-HHHHHHC-----------CCCEEEEECCHHHHHHHHHHHHH
Q ss_conf 88884389999999988739733799863376469999-9999971-----------99789993163468999999998
Q gi|254780991|r 148 HPSGDQPAAIAQLLKGIHSREKVQLLLGVTGSGKTFTM-AKVIEAM-----------QRPAIVMAPNKILAAQLYSEFKN 215 (805)
Q Consensus 148 ~P~gdQ~~Ai~~L~~~l~~g~~~qlL~GVTGSGKTevy-a~lI~~~-----------gr~aLvLvPei~La~QL~~rfk~ 215 (805)
T Consensus 32 ~p~~~Q~~a~~~i~~----G-~~~Li~ApTGsGKTlAaflp~l~~l~~~~~~~~~~~~~~~LyIsPLkAL~~D~~r~L~~ 106 (878)
T PRK13767 32 TFTPPQRYAIPLIHE----G-KNVLISSPTGSGKTLAAFLGIIDELFRLAEEGELEDSVYCIYVSPLRALNNDIHRNLEE 106 (878)
T ss_pred CCCHHHHHHHHHHHC----C-CCEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCHHHHHHHHHHHHHH
T ss_conf 999899999999967----9-98899899981399999999999998500036778872899968479889999998886
Q ss_pred -------HC---CC----CEEEEEEECCCCCCCCCCCCCCCCCHHHHCCCCHHHHHHHHHHHHHHHCCCCEEEECCHHHH
Q ss_conf -------67---89----83899862134444210155543210221035889999999999998549984998277896
Q gi|254780991|r 216 -------FF---PH----NAVEYFVSYYDYYQPEAYVPRTDTYIEKESSINEQIDRMRHSATRSLLERNDCIVVSSVSCI 281 (805)
Q Consensus 216 -------~F---p~----n~V~~f~S~~~~yqpEay~p~~d~~i~k~~s~n~~i~~~R~~a~~~l~~~~~~IVVgsrSAI 281 (805)
T Consensus 107 pl~~i~~~~~~~g~~~~~i~v~vr~GDT--------------------~-----~~er----~r~~~~pp~ILiTTPEsL 157 (878)
T PRK13767 107 PLEEIREIAKERGIELPEIRHAVRTGDT--------------------S-----SYEK----QKMLRKPPHILITTPETL 157 (878)
T ss_pred HHHHHHHHHHHCCCCCCCCEEEEECCCC--------------------C-----HHHH----HHHHHCCCCEEECCHHHH
T ss_conf 9999999987527887774477636999--------------------9-----9999----999748998798798999
Q ss_pred CC-CCCH-----HHHHCCEEEEECCCC
Q ss_conf 16-8983-----477225799941981
Q gi|254780991|r 282 YG-IGSV-----ESYSQMIVQLKIGDS 302 (805)
Q Consensus 282 fg-l~~P-----~~~lglIIvdEehd~ 302 (805)
T Consensus 158 ~lll~~~~~~~~l~~l~~VIvDE~H~l 184 (878)
T PRK13767 158 AILLNSPKFREKLRTVKWVIVDEIHSL 184 (878)
T ss_pred HHHHCCHHHHHHHCCCCEEEECCCHHH
T ss_conf 999549679998558999998171675