>TIGR00631 uvrb excinuclease ABC, B subunit; InterPro: IPR004807 All proteins in this family for which functions are known are DNA helicases that function in the nucleotide excision repair and are endonucleases that make the 3' incision next to DNA damage. They are part of a pathway requiring UvrA, UvrB, UvrC, and UvrD homologs.; GO: 0009381 excinuclease ABC activity, 0006289 nucleotide-excision repair, 0005737 cytoplasm, 0009380 excinuclease repair complex.

Probab=100.00 E-value=0 Score=1914.31 Aligned_cols=655 Identities=60% Similarity=0.964 Sum_probs=639.5 Q ss_pred CEEEEECCCCCCCHHHHHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHCCC Q ss_conf 54775188888843899999999887397337998633764699999999971997899931634689999999986789 Q gi|254780991|r 140 FFQMQTDYHPSGDQPAAIAQLLKGIHSREKVQLLLGVTGSGKTFTMAKVIEAMQRPAIVMAPNKILAAQLYSEFKNFFPH 219 (805) Q Consensus 140 ~f~l~~~~~P~gdQ~~Ai~~L~~~l~~g~~~qlL~GVTGSGKTevya~lI~~~gr~aLvLvPei~La~QL~~rfk~~Fp~ 219 (805) T Consensus 1 ~F~L~s~f~P~GDQP~AI~~L~~~l~~G~~~QtLLGvTGsGKTFT~AnVIa~~~rPTLV~aHNKTLAAQLY~EfKefFPe 80 (667) T TIGR00631 1 LFKLKSPFQPAGDQPKAIAKLVEGLEAGEKEQTLLGVTGSGKTFTMANVIAQVQRPTLVLAHNKTLAAQLYNEFKEFFPE 80 (667) T ss_pred CCEECCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEEECCCHHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHHHHHCCC T ss_conf 96444788567881899999999985688714785321486278898999984798499857776799999999863867 Q ss_pred CEEEEEEECCCCCCCCCCCCCCCCCHHHHCCCCHHHHHHHHHHHHHHHCCCCEEEECCHHHHCCCCCHHHHHCCEEEEEC Q ss_conf 83899862134444210155543210221035889999999999998549984998277896168983477225799941 Q gi|254780991|r 220 NAVEYFVSYYDYYQPEAYVPRTDTYIEKESSINEQIDRMRHSATRSLLERNDCIVVSSVSCIYGIGSVESYSQMIVQLKI 299 (805) Q Consensus 220 n~V~~f~S~~~~yqpEay~p~~d~~i~k~~s~n~~i~~~R~~a~~~l~~~~~~IVVgsrSAIfgl~~P~~~lglIIvdEe 299 (805) T Consensus 81 NAVEYFvSYYDYYQPEAYvP~~DtyIEKdaSINdeIerlR~SAT~SLl~RrDVIVVASVScIYGLG~P~~Y~~~~~~l~v 160 (667) T TIGR00631 81 NAVEYFVSYYDYYQPEAYVPSKDTYIEKDASINDEIERLRLSATKSLLERRDVIVVASVSCIYGLGSPEEYLKMVLHLEV 160 (667) T ss_pred CCEEEEEECCCCCCCCCCCCCCCCEEECCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEECCCCCCHHHHCCEEEEEE T ss_conf 72452552032378732147988413045530046767788988864237878999875520688882556422786540 Q ss_pred CCCCCHHHHHHHHHHCCCCCCHHHHHHHHHCCCCEEEECCC-CCHHHHHHHHCCCCCCHHHHHCCCCCCCCHHHHCCCCC Q ss_conf 98111787532343117656338775453318724783178-88778887310444200222101666400111000010 Q gi|254780991|r 300 GDSVEQKELLSSLVKQQYKRQDIGIIRGTFRVCGDSIEIFP-SHLEDVAWRVSMFGNDIEEISEFYPLTGQKIRNVETIK 378 (805) Q Consensus 300 hd~~~~~~~~~~l~~~~Y~R~D~a~~RG~f~~rg~ILdsat-ps~Es~~~Rie~f~deIe~I~~fDplT~~~~~~~~~~~ 378 (805) T Consensus 161 G~~~~~~~ll~~LV~lqY~RNd~~f~RG~FRvrGDVvEIfP~~~~~~~~~RiEfF~DEie~I~~~dpLtg~~~~~~~~~~ 240 (667) T TIGR00631 161 GKEIDRRELLRRLVELQYERNDVDFQRGTFRVRGDVVEIFPAAYEDEFAVRIEFFGDEIERISLVDPLTGEVLRELDSFT 240 (667) T ss_pred CCCCCHHHHHHHHHHHCEEECCEECCCCCEEEEEEEEEEECCCCCCCCEEEEEEECCEEEEHHHHCCCCCCHHHHCCCEE T ss_conf 78558899998863403057123405771257631898634776777248998525543202120511051110056158 Q ss_pred CHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCCCCCC Q ss_conf 00000002563678875455899899899887544332110012444477775332112014510113331144655562 Q gi|254780991|r 379 IYANSHYVTPRPTLNTAMKYIKEELKMRLIELEKEGRLLEAQRLEQRITYDLEMLETTGSCQSIENYSRYLTGRNPGEPP 458 (805) Q Consensus 379 i~Pa~~~v~~~e~l~~a~~~i~~el~~rl~~~~~~~~~~ea~rL~qR~~~dle~l~e~G~~~gienyS~~L~~r~~ge~P 458 (805) T Consensus 241 ifPA~HyV~p~e~~~~Ai~~I~~EL~eRl~~f~~~~kllEaQRL~qRT~yDLEMl~e~G~C~GIENYSRhl~GR~~GEpP 320 (667) T TIGR00631 241 IFPASHYVTPEERLERAIKEIEKELEERLKYFEEQGKLLEAQRLKQRTEYDLEMLREMGYCSGIENYSRHLSGRKPGEPP 320 (667) T ss_pred EECCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHCCCCCCCCCCCCC T ss_conf 60540002580479999999999999999999877951788889886887788875067337700000021677763159 Q ss_pred HHHHHCC---CCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCC Q ss_conf 0233026---5442132101234475445432456541333235766554443222111010012155545444686754 Q gi|254780991|r 459 PTLFEYI---PEDSLLFVDESHVTIPQISGMYRGDFHRKATLAEYGFRLPSCMDNRPLRFEEWNCLRPTTIVVSATPGSW 535 (805) Q Consensus 459 ~tL~dY~---p~d~ll~idesh~~~pqi~~~~~~d~~RK~~l~~~gfrlp~~~~n~pl~f~e~~~~~~~~~~~satPg~~ 535 (805) T Consensus 321 ~tLlDYF~gfP~DfLlviDESHVT~PQ~~GMY~GD~SRK~~LVeYGFRLPSAlDNRPLkfeEF~~~~~Q~vyVSATPG~~ 400 (667) T TIGR00631 321 YTLLDYFIGFPEDFLLVIDESHVTLPQIGGMYNGDRSRKQTLVEYGFRLPSALDNRPLKFEEFEERINQVVYVSATPGDY 400 (667) T ss_pred CCHHHHCCCCCCCEEEEEEECCCCHHHHHHHHHCCHHHHHHHHHCCCCCCHHCCCCCCCHHHHHHHCCCEEEEECCCCHH T ss_conf 64776504688650898840257502213441304676543320277530013587898799998559889996388589 Q ss_pred CCHHHHHHHHHHHHCCCCCCCCCCEECCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCEEEECCCC Q ss_conf 20132200234320124467720000133101688999999863023212466214789999999986359668732576 Q gi|254780991|r 536 ELEQCQGIIVEQIIRPTGLVDPPVEIRSARTQVEDVYDEINLAAQQGLRILLTVLTKRMAEDLTEYLYERNIRVRYMHSE 615 (805) Q Consensus 536 e~e~~~~~~~eqi~rptg~idp~ieir~~~~qvddl~~ei~~~~~~~~R~l~~~~tkr~~e~l~~~~~~~~i~~~~~h~~ 615 (805) T Consensus 401 E~e~S~~~vvEQiiRPTGLlDP~i~VRP~~gQvdDL~~EI~~R~~~~ERvLVTTLTKkMAEdLTdYl~E~Gikv~YLHSe 480 (667) T TIGR00631 401 ELEQSGGNVVEQIIRPTGLLDPEIEVRPTDGQVDDLLSEIRQRVARNERVLVTTLTKKMAEDLTDYLKELGIKVRYLHSE 480 (667) T ss_pred HHHHHCCCEEEEEECCCCCCCCEEEEECCCCHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHCCCCEEEEECCH T ss_conf 99732691589987377864883688358515888899999999728948998201677889999970588379871455 Q ss_pred CCHHHHHHHHHHHHCCCCCEEEEHHHHHCCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHCCCCCCEEEEEECCCCH Q ss_conf 45789999999973189869998458753578777117999628856744460137766543127998669998248988 Q gi|254780991|r 616 VKTLERIEIIRDLRLGKFDVLVGINLLREGLDIPECGLVAILDADKEGFLRSKTSLIQTIGRAARNVNSKVILYADTITK 695 (805) Q Consensus 616 ~~~~~r~~il~~~~~g~~diLvgt~~~akGlD~p~v~lV~i~dAD~~~f~~~~~~~~q~~GRagR~~~G~~il~ad~~t~ 695 (805) T Consensus 481 Idt~ER~eiirdLR~G~fDVLVGINLLREGLDlPEVSLVAILDADKEGFLRSerSLIQTIGRAARN~~G~VilYAD~iT~ 560 (667) T TIGR00631 481 IDTLERVEIIRDLRLGEFDVLVGINLLREGLDLPEVSLVAILDADKEGFLRSERSLIQTIGRAARNVNGKVILYADKITD 560 (667) T ss_pred HHHHHHHHHHHHHCCCCCEEEEECCHHHCCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEECCCCCH T ss_conf 78999999999844788408860002002465114889976327888998663027889888752579659997287007 Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH-H-------HHHHHCCCHHHHHHHHHHH Q ss_conf 9999999878888888876887188530234667776656665555555543-3-------3343127978899999999 Q gi|254780991|r 696 SIQLAIDETTRRREKQLEHNKKHNINPQSVKEKIMEVIDPILLEDAATTNIS-I-------DAQQLSLSKKKGKAHLKSL 767 (805) Q Consensus 696 ~~~~ai~e~~rrr~~q~~~n~~~~i~p~~i~k~i~~~~~~~~~~~~~~~~~~-~-------~~~~~~~~~~~~~~~i~~l 767 (805) T Consensus 561 sM~~AI~ET~RRR~~Q~~YNe~HgItP~ti~K~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~I~~L 640 (667) T TIGR00631 561 SMQKAIEETERRRKIQIAYNEEHGITPQTIRKKIKDILDIELKEKEDAAKKKKKGKVAEEPAEDASDLSEKELKKLIKQL 640 (667) T ss_pred HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCHHHCCHHHHHHHHHHH T ss_conf 89999998788899999999753897885405688877777644455555320231122210313208987999999999 Q ss_pred HHHHHHHHHHCCHHHHHHHHHHHHHHH Q ss_conf 999999997414899999999999999 Q gi|254780991|r 768 RKQMHLAADNLNFEEAARIRDEIKRLK 794 (805) Q Consensus 768 ~~~m~~aa~~l~fE~Aa~lRD~i~~l~ 794 (805) T Consensus 641 e~~M~~aA~~l~FE~AA~~RD~I~~L~ 667 (667) T TIGR00631 641 EKEMKQAARNLEFEEAARLRDEIKELK 667 (667) T ss_pred HHHHHHHHHHHCHHHHHHHHHHHHHCC T ss_conf 999999997526789999988886239

HHsearch alignment for GI: 254780991 and conserved domain: TIGR00631