HHsearch alignment for GI: 254780991 and conserved domain: TIGR02533
>TIGR02533 type_II_gspE general secretory pathway protein E; InterPro: IPR013369 GspE, the E protein of the type II secretion system, is also referred to as the main terminal branch of the general secretion pathway. ; GO: 0005524 ATP binding, 0008565 protein transporter activity, 0015628 protein secretion by the type II secretion system, 0015627 type II protein secretion system complex.
Probab=95.15 E-value=0.23 Score=28.81 Aligned_cols=93 Identities=27% Similarity=0.407 Sum_probs=63.8
Q ss_pred CCHHHHHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHHHHCCCC-EEEEECCHHHHHHHHHHHHHHCCCCEEEEEEECC
Q ss_conf 843899999999887397337998633764699999999971997-8999316346899999999867898389986213
Q gi|254780991|r 151 GDQPAAIAQLLKGIHSREKVQLLLGVTGSGKTFTMAKVIEAMQRP-AIVMAPNKILAAQLYSEFKNFFPHNAVEYFVSYY 229 (805)
Q Consensus 151 gdQ~~Ai~~L~~~l~~g~~~qlL~GVTGSGKTevya~lI~~~gr~-aLvLvPei~La~QL~~rfk~~Fp~n~V~~f~S~~ 229 (805)
T Consensus 228 Gm~~~~l~~~~~li~rpHGIiLVTGPTGSGKtTTLYaaL~~LN~~~~NIlTv-----------------EDPVEY~i~GI 290 (495)
T TIGR02533 228 GMSPELLSSLERLIKRPHGIILVTGPTGSGKTTTLYAALSRLNTPERNILTV-----------------EDPVEYQIEGI 290 (495)
T ss_pred CCCHHHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHHHHCCCCCCEEEE-----------------ECCEEEEECCC
T ss_conf 8888899999999718896188417789852588999998635899715686-----------------57824762487
Q ss_pred CCCCCCCCCCCCCCCHHHHCCCCHHHHHHHHHHHHHHHCC-CCEEEECC
Q ss_conf 4444210155543210221035889999999999998549-98499827
Q gi|254780991|r 230 DYYQPEAYVPRTDTYIEKESSINEQIDRMRHSATRSLLER-NDCIVVSS 277 (805)
Q Consensus 230 ~~yqpEay~p~~d~~i~k~~s~n~~i~~~R~~a~~~l~~~-~~~IVVgs 277 (805)
T Consensus 291 g--Q---------------~Qvn~kIglTFA~GLRaILRQDPDiiMvGE 322 (495)
T TIGR02533 291 G--Q---------------IQVNPKIGLTFAAGLRAILRQDPDIIMVGE 322 (495)
T ss_pred C--E---------------EEECCCCCHHHHHHHHHHHCCCCCEEEEEC
T ss_conf 6--3---------------651465430388887886427998899823