HHsearch alignment for GI: 254780991 and conserved domain: TIGR03499
>TIGR03499 FlhF flagellar biosynthetic protein FlhF.
Probab=96.35 E-value=0.017 Score=37.23 Aligned_cols=23 Identities=48% Similarity=0.570 Sum_probs=17.0
Q ss_pred CEEEEEEECCCCHHHHHHHHHHH
Q ss_conf 33799863376469999999997
Q gi|254780991|r 169 KVQLLLGVTGSGKTFTMAKVIEA 191 (805)
Q Consensus 169 ~~qlL~GVTGSGKTevya~lI~~ 191 (805)
T Consensus 195 ~vi~lvGPTGVGKTTTiAKLAa~ 217 (282)
T TIGR03499 195 GVIALVGPTGVGKTTTLAKLAAR 217 (282)
T ss_pred CEEEEECCCCCCHHHHHHHHHHH
T ss_conf 27999778887578899999999