HHsearch alignment for GI: 254780991 and conserved domain: cd00009
>cd00009 AAA The AAA+ (ATPases Associated with a wide variety of cellular Activities) superfamily represents an ancient group of ATPases belonging to the ASCE (for additional strand, catalytic E) division of the P-loop NTPase fold. The ASCE division also includes ABC, RecA-like, VirD4-like, PilT-like, and SF1/2 helicases. Members of the AAA+ ATPases function as molecular chaperons, ATPase subunits of proteases, helicases, or nucleic-acid stimulated ATPases. The AAA+ proteins contain several distinct features in addition to the conserved alpha-beta-alpha core domain structure and the Walker A and B motifs of the P-loop NTPases.
Probab=93.70 E-value=0.41 Score=26.87 Aligned_cols=42 Identities=29% Similarity=0.340 Sum_probs=31.7
Q ss_pred CHHHHHHHHHHHHHC-CCCEEEEEEECCCCHHHHHHHHHHHCC
Q ss_conf 438999999998873-973379986337646999999999719
Q gi|254780991|r 152 DQPAAIAQLLKGIHS-REKVQLLLGVTGSGKTFTMAKVIEAMQ 193 (805)
Q Consensus 152 dQ~~Ai~~L~~~l~~-g~~~qlL~GVTGSGKTevya~lI~~~g 193 (805)
T Consensus 2 ~~~~~~~~l~~~~~~~~~~~ill~GppGtGKT~la~~ia~~~~ 44 (151)
T cd00009 2 GQEEAIEALREALELPPPKNLLLYGPPGTGKTTLARAIANELF 44 (151)
T ss_pred CCHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHC
T ss_conf 8579999999998187998089989999886599999999712