>gnl|CDD|28960 cd00079, HELICc, Helicase superfamily c-terminal domain; associated with DEXDc-, DEAD-, and DEAH-box proteins, yeast initiation factor 4A, Ski2p, and Hepatitis C virus NS3 helicases; this domain is found in a wide variety of helicases and helicase related proteins; may not be an autonomously folding unit, but an integral part of the helicase; 4 helicase superfamilies at present according to the organization of their signature motifs; all helicases share the ability to unwind nucleic acid duplexes with a distinct directional polarity; they utilize the free energy from nucleoside triphosphate hydrolysis to fuel their translocation along DNA, unwinding the duplex in the process. Length = 131

 Score = 90.0 bits (223), Expect = 2e-18
 Identities = 35/130 (26%), Positives = 66/130 (50%), Gaps = 6/130 (4%)

Query: 561 IRSARTQVEDVYDEINLAAQQGLRILLTVLTKRMAEDLTEYLYERNIRVRYMHSEVKTLE 620
           +     ++E + + +    ++G ++L+   +K+M ++L E L +  I+V  +H +    E
Sbjct: 7   LPVEDEKLEALLELLKEHLKKGGKVLIFCPSKKMLDELAELLRKPGIKVAALHGDGSQEE 66

Query: 621 RIEIIRDLRLGKFDVLVGINLLREGLDIPECGLVAILDADKEGFLRSKTSLIQTIGRAAR 680
           R E+++D R G+  VLV  +++  G+D+P   +V   D        S +S +Q IGRA R
Sbjct: 67  REEVLKDFREGEIVVLVATDVIARGIDLPNVSVVINYDLP-----WSPSSYLQRIGRAGR 121

Query: 681 NVN-SKVILY 689
                  IL 
Sbjct: 122 AGQKGTAILL 131