RPSBLAST alignment for GI: 254780991 and conserved domain: COG0556
>gnl|CDD|30902 COG0556, UvrB, Helicase subunit of the DNA excision repair complex [DNA replication, recombination, and repair]. Length = 663
Score = 1022 bits (2645), Expect = 0.0
Identities = 419/655 (63%), Positives = 507/655 (77%), Gaps = 2/655 (0%)
Query: 141 FQMQTDYHPSGDQPAAIAQLLKGIHSREKVQLLLGVTGSGKTFTMAKVIEAMQRPAIVMA 200
F++ + + P+GDQP AIA+L++GI + K Q LLGVTGSGKTFTMA VI +QRP +V+A
Sbjct: 5 FKLHSPFKPAGDQPEAIAELVEGIENGLKHQTLLGVTGSGKTFTMANVIAKVQRPTLVLA 64
Query: 201 PNKILAAQLYSEFKNFFPHNAVEYFVSYYDYYQPEAYVPRTDTYIEKESSINEQIDRMRH 260
NK LAAQLYSEFK FFP NAVEYFVSYYDYYQPEAYVP TDTYIEK++SIN++IDR+RH
Sbjct: 65 HNKTLAAQLYSEFKEFFPENAVEYFVSYYDYYQPEAYVPSTDTYIEKDASINDEIDRLRH 124
Query: 261 SATRSLLERNDCIVVSSVSCIYGIGSVESYSQMIVQLKIGDSVEQKELLSSLVKQQYKRQ 320
SATRSLLER D IVV+SVSCIYG+GS E Y +M++ L++G ++++ELL LV QY+R
Sbjct: 125 SATRSLLERRDVIVVASVSCIYGLGSPEEYLKMMLSLEVGQEIDRRELLRKLVDLQYERN 184
Query: 321 DIGIIRGTFRVCGDSIEIFPSHLEDVAWRVSMFGNDIEEISEFYPLTGQKIRNVETIKIY 380
D+ RGTFRV GD +EIFP++ +D A R+ FG++IE ISEF PLTGQ I ++ IY
Sbjct: 185 DVDFQRGTFRVRGDVVEIFPAYYDDEAIRIEFFGDEIERISEFDPLTGQVIGELDRFTIY 244
Query: 381 ANSHYVTPRPTLNTAMKYIKEELKMRLIELEKEGRLLEAQRLEQRITYDLEMLETTGSCQ 440
SHYVTPR L A++ IKEEL+ RL EK +LLEAQRLEQR YDLEML TG C
Sbjct: 245 PASHYVTPRERLEQAIESIKEELEERLKFFEKNNKLLEAQRLEQRTEYDLEMLRETGYCS 304
Query: 441 SIENYSRYLTGRNPGEPPPTLFEYIPEDSLLFVDESHVTIPQISGMYRGDFHRKATLAEY 500
IENYSR+LTGR PGEPP TLF+Y P+D LLF+DESHVT+PQI GMY GD RK TL EY
Sbjct: 305 GIENYSRHLTGRKPGEPPYTLFDYFPDDFLLFIDESHVTVPQIGGMYNGDRSRKQTLVEY 364
Query: 501 GFRLPSCMDNRPLRFEEWNCLRPTTIVVSATPGSWELEQCQGIIVEQIIRPTGLVDPPVE 560
GFRLPS +DNRPL+FEE+ P TI VSATPG +ELEQ G +VEQIIRPTGL+DP +E
Sbjct: 365 GFRLPSALDNRPLKFEEFEAKIPQTIYVSATPGDYELEQSGGNVVEQIIRPTGLLDPEIE 424
Query: 561 IRSARTQVEDVYDEINLAAQQGLRILLTVLTKRMAEDLTEYLYERNIRVRYMHSEVKTLE 620
+R + QV+D+ EI + R+L+T LTK+MAEDLTEYL E I+VRY+HS++ TLE
Sbjct: 425 VRPTKGQVDDLLSEIRKRVAKNERVLVTTLTKKMAEDLTEYLKELGIKVRYLHSDIDTLE 484
Query: 621 RIEIIRDLRLGKFDVLVGINLLREGLDIPECGLVAILDADKEGFLRSKTSLIQTIGRAAR 680
R+EIIRDLRLG+FDVLVGINLLREGLD+PE LVAILDADKEGFLRS+ SLIQTIGRAAR
Sbjct: 485 RVEIIRDLRLGEFDVLVGINLLREGLDLPEVSLVAILDADKEGFLRSERSLIQTIGRAAR 544
Query: 681 NVNSKVILYADTITKSIQLAIDETTRRREKQLEHNKKHNINPQSVKEKIMEVIDPILLED 740
NVN KVILYAD IT S+Q AIDET RRRE Q+ +N++H I PQ++K+KI +++D ED
Sbjct: 545 NVNGKVILYADKITDSMQKAIDETERRREIQMAYNEEHGITPQTIKKKIRDILDGEYEED 604
Query: 741 AATTNISIDAQQLSLSKKKGKAHLKSLRKQMHLAADNLNFEEAARIRDEIKRLKS 795
I A +SKK+ + +K L K+M AA NL FEEAAR+RDEIK LK
Sbjct: 605 EYKAKIEKKAS--KMSKKELEKLIKKLEKEMKEAAKNLEFEEAARLRDEIKELKE 657