HHsearch alignment for GI: 254780992 and conserved domain: COG1946

Probab=93.68  E-value=0.4  Score=26.20  Aligned_cols=88  Identities=16%  Similarity=0.120  Sum_probs=60.1

Q ss_pred             ECHHHCCCCC-CEEHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEEECCCCCCCEEEEEEEEEEECCCEEEEEEEEEE
Q ss_conf             4833427478-430899999999999999999738983255752034321467573899999999621650799999999
Q gi|254780992|r   39 TMPTDVNLDG-NVFGGWIMSQIDIACGIRASQLCKCRVVTKAVTELLFEKPIQVSDLVHIYTQIRKIGKTSVTIYCDVWT  117 (152)
Q Consensus        39 ~~P~~~N~~G-~lfGG~ll~~~D~aa~~~A~~~~~~~~vt~~id~i~F~~Pv~~Gd~l~~~a~V~~~G~tSm~V~V~V~~  117 (152)
T Consensus        22 frG~s~~~g~~~vFGGqvvaQAL~----Aa~~TV~~~r~vhS~h~-yFl~pgd~~~pi~y~Ve~lRdG~sfs~rrV~aiQ   96 (289)
T COG1946          22 FRGSSPDSGLRRVFGGQVVAQALV----AALRTVPEDRVVHSLHS-YFLRPGDPEQPIIYDVERLRDGRSFSTRRVDAIQ   96 (289)
T ss_pred             EECCCCCCCCCCCCCCCHHHHHHH----HHHHHCCCCCCCCEEHH-HHCCCCCCCCCEEEEEEECCCCCCEEEEEEEEEE
T ss_conf             434787868740255124999999----99841687777643426-4448998678669998862589735767999998


Q ss_pred             ECCCCCCCEEEEEEEEEEEEEE
Q ss_conf             5377888608999999999999
Q gi|254780992|r  118 CPRNASSDVLQKTCEATVVMVA  139 (152)
Q Consensus       118 ~~~~~~~~~~~~v~~a~fTfVa  139 (152)
T Consensus        97 ------~g--~~If~~~ASF~~  110 (289)
T COG1946          97 ------HG--KLIFSATASFQV  110 (289)
T ss_pred             ------CC--EEEEEEEEECCC
T ss_conf             ------99--999998700067