HHsearch alignment for GI: 254780992 and conserved domain: TIGR00369

>TIGR00369 unchar_dom_1 uncharacterized domain 1; InterPro: IPR003736 This domain is found in the PAAI protein from Escherichia coli that may be involved in phenylacetic acid degradation and in a few others that may be transcription regulators . Most proteins containing this domain consist almost entirely of a single copy of this domain. A protein from C. elegans consists of two tandem copies of the domain. The domain is also found as the N-terminal region of an apparent initiation factor eIF-2B alpha subunit of Aquifex aeolicus..
Probab=98.49  E-value=2.3e-06  Score=56.90  Aligned_cols=105  Identities=13%  Similarity=0.135  Sum_probs=80.8

Q ss_pred             CCCCCCCE-EEEEEECHHHCCC--CCCEEHHHHHHHHHHHHHHHHHHHCC--CCCEEEEEEEEEEECCCCCCCEEEEEEE
Q ss_conf             05899834-8999848334274--78430899999999999999999738--9832557520343214675738999999
Q gi|254780992|r   26 QMHSSGVL-TLKIQTMPTDVNL--DGNVFGGWIMSQIDIACGIRASQLCK--CRVVTKAVTELLFEKPIQVSDLVHIYTQ  100 (152)
Q Consensus        26 ~~~~~~~~-~l~~~~~P~~~N~--~G~lfGG~ll~~~D~aa~~~A~~~~~--~~~vt~~id~i~F~~Pv~~Gd~l~~~a~  100 (152)
T Consensus        11 ~~~~~~~~g~~~~p~~~~~~~~~p~g~~hGG~~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~rp~~~g~~~~a~~~   90 (122)
T TIGR00369        11 EELGDGELGEAEMPVDERTLQPGPFGSLHGGVSAALADTAGGSAAGYLCLPGGAAVVGLELNVNYLRPAREGGKLRAIAE   90 (122)
T ss_pred             EECCCCEEEEEEEEEEHHHCCCCCCCEECCHHHHHHHHHHHHHHHHHCCCCCHHHEEEEEEEEECCCCCCCCCEEEEEEE
T ss_conf             20587601168875202103788641001006656677653355432035110101100000000222246971688778


Q ss_pred             EEEECCCEEEEEEEEEEECCCCCCCEEEEEEEEEEEE
Q ss_conf             9962165079999999953778886089999999999
Q gi|254780992|r  101 IRKIGKTSVTIYCDVWTCPRNASSDVLQKTCEATVVM  137 (152)
Q Consensus       101 V~~~G~tSm~V~V~V~~~~~~~~~~~~~~v~~a~fTf  137 (152)
T Consensus        91 ~~~~g~~~~~~~~~~~~~-------~~~~~~~~~~~~  120 (122)
T TIGR00369        91 PVHLGRQTGVAEIEIVDE-------QGRLCALSRGTL  120 (122)
T ss_pred             EEEECCCEEEEEEEEECC-------CCCEEEEECEEE
T ss_conf             863066102688898876-------674786411022