HHsearch results for GI: 254780992 and protein with PDBid: 1njk_A

>1njk_A Hypothetical protein YBAW; structural genomics, thioesterase, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.90A {Escherichia coli} SCOP: d.38.1.1
Probab=99.14  E-value=5.3e-09  Score=71.06  Aligned_cols=116  Identities=15%  Similarity=0.170  Sum_probs=90.8

Q ss_pred             CCCEEEEEEECHHHCCCCCCEEHHHHHHHHHHHHHHHH-------HHHCCC-CCEEEEEEEEEEECCCCCCCEEEEEEEE
Q ss_conf             98348999848334274784308999999999999999-------997389-8325575203432146757389999999
Q gi|254780992|r   30 SGVLTLKIQTMPTDVNLDGNVFGGWIMSQIDIACGIRA-------SQLCKC-RVVTKAVTELLFEKPIQVSDLVHIYTQI  101 (152)
Q Consensus        30 ~~~~~l~~~~~P~~~N~~G~lfGG~ll~~~D~aa~~~A-------~~~~~~-~~vt~~id~i~F~~Pv~~Gd~l~~~a~V  101 (152)
                      .+....+..+-..|+..+|.++=+..++|+++|-.-.-       .....+ ..+++. -.+.|++|++.||.|.+..++
T Consensus        20 ~~~~~~~i~Vr~~d~D~~ghVnn~~Yl~~~e~ar~~~l~~~g~~~~~~~~~~~~vv~~-~~i~y~~p~~~gd~i~v~~~i   98 (156)
T 1njk_A           20 QGHMQTQIKVRGYHLDVYQHVNNARYLEFLEEARWDGLENSDSFQWMTAHNIAFVVVN-ININYRRPAVLSDLLTITSQL   98 (156)
T ss_dssp             --CEEEEEECCGGGBCTTSSBCHHHHHHHHHHHHHHHHHSCHHHHHHHHTTEEEEEEE-EEEEECSCCCTTCEEEEEEEE
T ss_pred             CCCEEEEEEECHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCEEEEEE-EEEEEECCCCCCCCEEEEEEE
T ss_conf             5707999898999978888044799999999999999986486889985794699999-999980235589704899999


Q ss_pred             EEECCCEEEEEEEEEEECCCCCCCEEEEEEEEEEEEEEEC-CCCCCCCCCCC
Q ss_conf             9621650799999999537788860899999999999987-89880227999
Q gi|254780992|r  102 RKIGKTSVTIYCDVWTCPRNASSDVLQKTCEATVVMVAVD-EKGNPKSIRTE  152 (152)
Q Consensus       102 ~~~G~tSm~V~V~V~~~~~~~~~~~~~~v~~a~fTfVavD-e~g~P~pip~e  152 (152)
                      ...|++|+.+..+++..    .++  +.++++..++|.+| +.++|.|+|.+
T Consensus        99 ~~~~~~s~~~~~~i~~~----~~g--~~~a~~~~~~V~vd~~~~k~~~iP~~  144 (156)
T 1njk_A           99 QQLNGKSGILSQVITLE----PEG--QVVADALITFVCIDLKTQKALALEGE  144 (156)
T ss_dssp             EEEETTEEEEEEEEEET----TTT--EEEEEEEEEEEEEETTTTEEECSSTT
T ss_pred             EEECCEEEEEEEEEEEC----CCC--EEEEEEEEEEEEEECCCCEECCCCHH
T ss_conf             98088599999999999----999--69999999999999999919679999