HHsearch results for GI: 254780992 and protein with PDBid: 1njk_A
>1njk_A Hypothetical protein YBAW; structural genomics, thioesterase, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.90A {Escherichia coli} SCOP: d.38.1.1
Probab=99.14 E-value=5.3e-09 Score=71.06 Aligned_cols=116 Identities=15% Similarity=0.170 Sum_probs=90.8
Q ss_pred CCCEEEEEEECHHHCCCCCCEEHHHHHHHHHHHHHHHH-------HHHCCC-CCEEEEEEEEEEECCCCCCCEEEEEEEE
Q ss_conf 98348999848334274784308999999999999999-------997389-8325575203432146757389999999
Q gi|254780992|r 30 SGVLTLKIQTMPTDVNLDGNVFGGWIMSQIDIACGIRA-------SQLCKC-RVVTKAVTELLFEKPIQVSDLVHIYTQI 101 (152)
Q Consensus 30 ~~~~~l~~~~~P~~~N~~G~lfGG~ll~~~D~aa~~~A-------~~~~~~-~~vt~~id~i~F~~Pv~~Gd~l~~~a~V 101 (152)
.+....+..+-..|+..+|.++=+..++|+++|-.-.- .....+ ..+++. -.+.|++|++.||.|.+..++
T Consensus 20 ~~~~~~~i~Vr~~d~D~~ghVnn~~Yl~~~e~ar~~~l~~~g~~~~~~~~~~~~vv~~-~~i~y~~p~~~gd~i~v~~~i 98 (156)
T 1njk_A 20 QGHMQTQIKVRGYHLDVYQHVNNARYLEFLEEARWDGLENSDSFQWMTAHNIAFVVVN-ININYRRPAVLSDLLTITSQL 98 (156)
T ss_dssp --CEEEEEECCGGGBCTTSSBCHHHHHHHHHHHHHHHHHSCHHHHHHHHTTEEEEEEE-EEEEECSCCCTTCEEEEEEEE
T ss_pred CCCEEEEEEECHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCEEEEEE-EEEEEECCCCCCCCEEEEEEE
T ss_conf 5707999898999978888044799999999999999986486889985794699999-999980235589704899999
Q ss_pred EEECCCEEEEEEEEEEECCCCCCCEEEEEEEEEEEEEEEC-CCCCCCCCCCC
Q ss_conf 9621650799999999537788860899999999999987-89880227999
Q gi|254780992|r 102 RKIGKTSVTIYCDVWTCPRNASSDVLQKTCEATVVMVAVD-EKGNPKSIRTE 152 (152)
Q Consensus 102 ~~~G~tSm~V~V~V~~~~~~~~~~~~~~v~~a~fTfVavD-e~g~P~pip~e 152 (152)
...|++|+.+..+++.. .++ +.++++..++|.+| +.++|.|+|.+
T Consensus 99 ~~~~~~s~~~~~~i~~~----~~g--~~~a~~~~~~V~vd~~~~k~~~iP~~ 144 (156)
T 1njk_A 99 QQLNGKSGILSQVITLE----PEG--QVVADALITFVCIDLKTQKALALEGE 144 (156)
T ss_dssp EEEETTEEEEEEEEEET----TTT--EEEEEEEEEEEEEETTTTEEECSSTT
T ss_pred EEECCEEEEEEEEEEEC----CCC--EEEEEEEEEEEEEECCCCEECCCCHH
T ss_conf 98088599999999999----999--69999999999999999919679999