HHsearch results for GI: 254780992 and protein with PDBid: 1sh8_A
>1sh8_A Hypothetical protein PA5026; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.50A {Pseudomonas aeruginosa} SCOP: d.38.1.5
Probab=98.83 E-value=1.4e-08 Score=68.62 Aligned_cols=102 Identities=14% Similarity=0.266 Sum_probs=76.3
Q ss_pred CCCCEEEEEEECHHHCCCCCCEEHHHHHHHHHHHHHHHHHHHCCC---CCEEEEEEEEEEECCCCCCCEEEEEEEE----
Q ss_conf 998348999848334274784308999999999999999997389---8325575203432146757389999999----
Q gi|254780992|r 29 SSGVLTLKIQTMPTDVNLDGNVFGGWIMSQIDIACGIRASQLCKC---RVVTKAVTELLFEKPIQVSDLVHIYTQI---- 101 (152)
Q Consensus 29 ~~~~~~l~~~~~P~~~N~~G~lfGG~ll~~~D~aa~~~A~~~~~~---~~vt~~id~i~F~~Pv~~Gd~l~~~a~V---- 101 (152)
.++.+.++....|. .|++|++|||.+.+++|.++|.++.....+ .++|+.+ +++|++|++ |+ +.+++++
T Consensus 32 ~~g~~~l~~p~~~~-~N~~G~~hGG~~~tlaD~a~g~a~~~~~~~~~~~~~t~~~-~i~fl~pa~-g~-~~a~a~~~~~~ 107 (154)
T 1sh8_A 32 EPGYVRLRMPGAGN-ENHIGSMYAGALFTLAELPGGALFLTSFDSARFYPIVKEM-TLRFRRPAK-GD-IRVEARLDAER 107 (154)
T ss_dssp ETTEEEEEECSTTC-BCTTSSBCHHHHHHHHHTHHHHHHHHHSCTTTEEEEEEEE-EEEECSCCC-SC-EEEEEECCHHH
T ss_pred ECCEEEEEEECCCC-CCCCCCEEHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEE-EEEEECCCC-CC-EEEEEEECCHH
T ss_conf 69999999984702-1899858499999999999999999747877825999763-689842567-86-89999974002
Q ss_pred --------EEECCCEEEEEEEEEEECCCCCCCEEEEEEEEEEEEEEEC
Q ss_conf --------9621650799999999537788860899999999999987
Q gi|254780992|r 102 --------RKIGKTSVTIYCDVWTCPRNASSDVLQKTCEATVVMVAVD 141 (152)
Q Consensus 102 --------~~~G~tSm~V~V~V~~~~~~~~~~~~~~v~~a~fTfVavD 141 (152)
.+.||+...++++++. .++ ++++++..||+-..
T Consensus 108 ~~~~~~~~~~~gr~~~~~~~~i~d-----~~g--~lvA~~~~~~~i~p 148 (154)
T 1sh8_A 108 IRQLETEAGERGKAEYSLELQLTD-----EQG--EVVAESAALYQLRS 148 (154)
T ss_dssp HHHHHHHHHHHSEEEEEEEEEEEC-----TTC--CEEEEEEEEEEEEE
T ss_pred HHHHHHHHEECCCEEEEEEEEEEC-----CCC--CEEEEEEEEEEECC
T ss_conf 567766740278358999999992-----999--99999999999988