HHsearch results for GI: 254780992 and protein with PDBid: 1vpm_A
>1vpm_A Acyl-COA hydrolase; NP_241664.1, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI; HET: COA; 1.66A {Bacillus halodurans c-125} SCOP: d.38.1.1
Probab=100.00 E-value=5.7e-37 Score=234.91 Aligned_cols=121 Identities=26% Similarity=0.394 Sum_probs=114.1
Q ss_pred CCCCEEEEEEECHHHCCCCCCEEHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEEECCCCCCCEEEEEEEEEEECCCE
Q ss_conf 99834899984833427478430899999999999999999738983255752034321467573899999999621650
Q gi|254780992|r 29 SSGVLTLKIQTMPTDVNLDGNVFGGWIMSQIDIACGIRASQLCKCRVVTKAVTELLFEKPIQVSDLVHIYTQIRKIGKTS 108 (152)
Q Consensus 29 ~~~~~~l~~~~~P~~~N~~G~lfGG~ll~~~D~aa~~~A~~~~~~~~vt~~id~i~F~~Pv~~Gd~l~~~a~V~~~G~tS 108 (152)
+.+..++..++||+|+|++|++|||+||+|||++|++||++|++++++|+++|+++|++|+++||+|+++|+|+|+|++|
T Consensus 20 ~~~~~~~~~lv~P~d~N~~G~l~GG~ll~~~D~~a~~~A~r~~~~~~vt~svd~i~F~~Pv~~Gd~v~~~a~V~~~G~sS 99 (169)
T 1vpm_A 20 ERSRTIQTRLVLPPDTNHLGTIFGGKVLAYIDEIAALTAMKHANSAVVTASIDSVDFKSSATVGDALELEGFVTHTGRTS 99 (169)
T ss_dssp GGTCEEEEEECCGGGBCTTSBBCHHHHHHHHHHHHHHHHHHHHTSEEEEEEECCCCCCSCCBTTEEEEEEEEEEEECSSE
T ss_pred CCCEEEEEEEECHHHCCCCCCEEHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCEEECCCCCCCCEEEEEEEEEEECCEE
T ss_conf 75628999998867768788384899999999999999997359827999976689858777898999999999964458
Q ss_pred EEEEEEEEEECCCCCCCEEEEEEEEEEEEEEECCCCCCCCCCC
Q ss_conf 7999999995377888608999999999999878988022799
Q gi|254780992|r 109 VTIYCDVWTCPRNASSDVLQKTCEATVVMVAVDEKGNPKSIRT 151 (152)
Q Consensus 109 m~V~V~V~~~~~~~~~~~~~~v~~a~fTfVavDe~g~P~pip~ 151 (152)
|+|+++|++++...++ .+++++|+||||++|++|+|+|||+
T Consensus 100 ~~V~v~v~~~~~~~~~--~~~~~~~~ftfVavd~~gkp~~vp~ 140 (169)
T 1vpm_A 100 MEVYVRVHSNNLLTGE--RTLTTESFLTMVAVDESGKPKPVPQ 140 (169)
T ss_dssp EEEEEEEEEEETTTCC--EEEEEEEEEEEEEECTTSCBCCCCE
T ss_pred EEEEEEEEEECCCCCC--EEEEEEEEEEEEEECCCCCEEECCC
T ss_conf 9988999995389994--8999999999999889998655894