HHsearch results for GI: 254780992 and protein with PDBid: 2q78_A

>2q78_A Uncharacterized protein; TM0581, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; HET: MSE MLC; 2.20A {Thermotoga maritima MSB8} SCOP: d.38.1.7

Probab=97.31  E-value=0.0059  Score=35.66  Aligned_cols=85  Identities=14%  Similarity=0.006  Sum_probs=66.9

Q ss_pred             EEHHHHHHHHHHHHHHHHHHHCCCCCEEEE-EEEEEEECCCCCCCEEEEEEEEEEECCCEEEEEEEEEEECCCCCCCEEE
Q ss_conf             308999999999999999997389832557-5203432146757389999999962165079999999953778886089
Q gi|254780992|r   50 VFGGWIMSQIDIACGIRASQLCKCRVVTKA-VTELLFEKPIQVSDLVHIYTQIRKIGKTSVTIYCDVWTCPRNASSDVLQ  128 (152)
Q Consensus        50 lfGG~ll~~~D~aa~~~A~~~~~~~~vt~~-id~i~F~~Pv~~Gd~l~~~a~V~~~G~tSm~V~V~V~~~~~~~~~~~~~  128 (152)
                      +==..|+++|..++.-+...+-...-.|+. --++.-.+|.++|..+++.|+++.+..+.+++.|+++.+     .   .
T Consensus        48 lsTp~LialmE~aa~~~l~~~L~~g~tTVGt~v~I~HlaptpiG~~V~v~A~l~~vdgr~l~F~veA~d~-----~---~  119 (153)
T 2q78_A           48 VATSALIGVVHRVSYELLSRYLPNDYTAVVVETLARHVKAVPTGTRVAVGVRVVGVVGNRVKFRGIVMSG-----D---E  119 (153)
T ss_dssp             BCHHHHHHHHHHHHHHHHHTTSCTTEEEEEEEEEEEECSCCBSSEEEEEEEEEEEEETTEEEEEEEEEET-----T---E
T ss_pred             ECHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEEECCCCCCCCEEEEEEEEEEEECCEEEEEEEEEEC-----C---C
T ss_conf             8269999999999999999668999727889999998146799999999999999979999999999999-----9---7


Q ss_pred             EEEEEEEEEEEECC
Q ss_conf             99999999999878
Q gi|254780992|r  129 KTCEATVVMVAVDE  142 (152)
Q Consensus       129 ~v~~a~fTfVavDe  142 (152)
                      ++.+|..+=+.||.
T Consensus       120 ~Ig~GtH~R~IV~~  133 (153)
T 2q78_A          120 KILEAEFVRAIVPR  133 (153)
T ss_dssp             EEEEEEEEEEEEEH
T ss_pred             EEEEEEEEEEEEEH
T ss_conf             49999999999989