HHsearch results for GI: 254780992 and protein with PDBid: 3gek_A
>3gek_A Putative thioesterase YHDA; X-RAY, structure genomics, NESG, KR113, Q9CHK5_lacla, structural genomics, PSI-2; 2.24A {Lactococcus lactis subsp}
Probab=99.59 E-value=1.1e-13 Score=98.48 Aligned_cols=131 Identities=15% Similarity=0.157 Sum_probs=101.9
Q ss_pred CCHHHEEEEEEEECCCHHEEEEECCCC-CCCEEEEEEECHHHCCCCCCEEHHHHHHHHHHHHHHHHHHHCC--CCCEEEE
Q ss_conf 610000048744116101223330589-9834899984833427478430899999999999999999738--9832557
Q gi|254780992|r 3 DISKNINLLLINIITKKEVLMVCQMHS-SGVLTLKIQTMPTDVNLDGNVFGGWIMSQIDIACGIRASQLCK--CRVVTKA 79 (152)
Q Consensus 3 ~~~~~i~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~~~~P~~~N~~G~lfGG~ll~~~D~aa~~~A~~~~~--~~~vt~~ 79 (152)
|..-++|+.....++..... ++-+ -.....|..+.+.|.|++|.+|||.+++++|.++++++..... ..++|+.
T Consensus 2 ~~~~~l~~~~~~~~~d~~~~---~~~~~~~~~~~~m~v~~~h~np~G~lHGG~~aaL~D~a~g~a~~~~~~~~~~~vTi~ 78 (146)
T 3gek_A 2 NMIDQLNITDFQVFTDENSD---KFVSKIYKFSSKMILSDFHAQPQGFLNGGASLALAEITAGMASNAIGSGQYFAFGQS 78 (146)
T ss_dssp CHHHHTCEEEEEEEECSGGG---GSSSCCEEEEEEEECCGGGBCTTSBBCHHHHHHHHHHHHHHHHHHHHTTSCEEEEEE
T ss_pred CHHHHHCCCEEEEEECCCCC---EEEEEEEEEEEEEECCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHCCCCCEEEEEE
T ss_conf 75785088316743024776---422420368999985702529998172999999999999999987377662478999
Q ss_pred EEEEEEECCCCCCCEEEEEEEEEEECCCEEEEEEEEEEECCCCCCCEEEEEEEEEEEEEEECCCC
Q ss_conf 52034321467573899999999621650799999999537788860899999999999987898
Q gi|254780992|r 80 VTELLFEKPIQVSDLVHIYTQIRKIGKTSVTIYCDVWTCPRNASSDVLQKTCEATVVMVAVDEKG 144 (152)
Q Consensus 80 id~i~F~~Pv~~Gd~l~~~a~V~~~G~tSm~V~V~V~~~~~~~~~~~~~~v~~a~fTfVavDe~g 144 (152)
+ +++|++|++.|+.|.++|++.+.||+...++++++.+ ++ ++++.|..||..+....
T Consensus 79 l-~i~flrp~~~g~~l~a~a~v~~~Gr~i~~~~~ei~de-----~g--kliA~at~T~~ilpkk~ 135 (146)
T 3gek_A 79 I-NANHLNPKKCEGFVNARGLLLKNGKRNHVWEIKITDE-----NE--TLISQITVVNALVPQKN 135 (146)
T ss_dssp E-EEEECSCCBSSSEEEEEEEEEEECSSEEEEEEEEEET-----TC--CEEEEEEEEEEEEC---
T ss_pred E-EEEEEEEECCCCEEEEEEEEEECCCCEEEEEEEEECC-----CC--CEEEEEEEEEEEECCCC
T ss_conf 8-7688774123537999999963598599999999949-----99--99999999999947885