HHsearch results for GI: 254780992 and protein with PDBid: 3lw3_A
>3lw3_A HP0420 homologue; hotdog-fold, structural genomics, unknown function; 1.60A {Helicobacter felis} PDB: 3lwg_A
Probab=99.68 E-value=1.4e-15 Score=109.52 Aligned_cols=105 Identities=15% Similarity=0.143 Sum_probs=90.8
Q ss_pred CCCCEEEEEEECHHHCCCCCCEEHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEEECCCCCCCEEEEEEEEEEECCCE
Q ss_conf 99834899984833427478430899999999999999999738983255752034321467573899999999621650
Q gi|254780992|r 29 SSGVLTLKIQTMPTDVNLDGNVFGGWIMSQIDIACGIRASQLCKCRVVTKAVTELLFEKPIQVSDLVHIYTQIRKIGKTS 108 (152)
Q Consensus 29 ~~~~~~l~~~~~P~~~N~~G~lfGG~ll~~~D~aa~~~A~~~~~~~~vt~~id~i~F~~Pv~~Gd~l~~~a~V~~~G~tS 108 (152)
.+|...++..+.|+++|.+|.+|||.+++++|.+++.++ .....+|+.++ ++|++|++.||.|.++|++++.|+++
T Consensus 34 ~~G~~~~~l~v~~~~~n~~G~vHGG~i~tl~D~a~~~a~---~~~~~vT~~~~-i~fl~p~~~G~~l~a~A~vv~~g~r~ 109 (145)
T 3lw3_A 34 GSGKATVCLTPKEFMLCEDDVVHAGFIVGAASFAALCAL---NKKNSLISSMK-VNLLAPIEIKQEIYFNATITHTSSKK 109 (145)
T ss_dssp ETTEEEEEECCCGGGEEETTEECHHHHHHHHHHHHHHHH---CCTTEEEEEEE-EEECSCCCTTCCEEEEEEEEEECSSE
T ss_pred ECCEEEEEECCCHHHHCCCCCCCHHHEEHHHHHHHHHHH---CCCCEEEEEEE-EEEECCCCCCCEEEEEEEEEEECCCE
T ss_conf 699899997399899297891841025155654216653---77856971132-58821248999999999999959949
Q ss_pred EEEEEEEEEECCCCCCCEEEEEEEEEEEEEEECCCCC
Q ss_conf 7999999995377888608999999999999878988
Q gi|254780992|r 109 VTIYCDVWTCPRNASSDVLQKTCEATVVMVAVDEKGN 145 (152)
Q Consensus 109 m~V~V~V~~~~~~~~~~~~~~v~~a~fTfVavDe~g~ 145 (152)
..++++++.. + ..+.+|.|+++.+|+.--
T Consensus 110 ~~v~vev~~~-----d---~~V~~gt~~~~v~d~~~~ 138 (145)
T 3lw3_A 110 STIRVEGEFM-----E---IKVFEGDFEILVFEKRPF 138 (145)
T ss_dssp EEEEEEEEET-----T---EEEEEEEEEEEEC-----
T ss_pred EEEEEEEEEC-----C---EEEEEEEEEEEEECCHHH
T ss_conf 9999999999-----9---999999999999856554