HHSEARCH alignment of GI: 254780992 and SCOP domain: d1vh9a_

Alignment
>d1vh9a_ d.38.1.5 (A:) Hypothetical protein YbdB {Escherichia coli [TaxId: 562]}
Probab=99.53  E-value=2e-13  Score=95.57  Aligned_cols=105  Identities=12%  Similarity=0.154  Sum_probs=86.6

Q ss_pred             CCCCCCEEEEEEECHHHCCCCCCEEHHHHHHHHHHHHHHHHHHHCC--CCCEEEEEEEEEEECCCCCCCEEEEEEEEEEE
Q ss_conf             5899834899984833427478430899999999999999999738--98325575203432146757389999999962
Q gi|254780992|r   27 MHSSGVLTLKIQTMPTDVNLDGNVFGGWIMSQIDIACGIRASQLCK--CRVVTKAVTELLFEKPIQVSDLVHIYTQIRKI  104 (152)
Q Consensus        27 ~~~~~~~~l~~~~~P~~~N~~G~lfGG~ll~~~D~aa~~~A~~~~~--~~~vt~~id~i~F~~Pv~~Gd~l~~~a~V~~~  104 (152)
                      .-.+|.+.++..+.|.+.|++|.+|||.+++++|.+++.++.....  ..++|+.+ +++|++|++.|+ +.++|++++.
T Consensus        31 ~~~~g~~~~~~~v~~~~~n~~g~~HGG~iatl~D~~~~~a~~~~~~~~~~~vT~~l-~v~flrp~~~g~-l~a~a~v~~~  108 (138)
T d1vh9a_          31 RLGDDVLEAEMPVDTRTHQPFGLLHGGASAALAETLGSMAGFMMTRDGQCVVGTEL-NATHHRPVSEGK-VRGVCQPLHL  108 (138)
T ss_dssp             EECSSCEEEEEECSTTTBCTTSSBCHHHHHHHHHHHHHHHHHTTCCTTCCEEEEEE-EEEECSCCCSSE-EEEEEEEEEE
T ss_pred             EEECCEEEEEEECCHHHCCCCCCEECCHHHHHHHHHHHHHHHHHCCCCCCCCCCCC-CEEEEECCCCCE-EEEEEEEEEC
T ss_conf             99599899999959999299981614055445778799999861345652130124-326972168976-9999999992


Q ss_pred             CCCEEEEEEEEEEECCCCCCCEEEEEEEEEEEEEEE
Q ss_conf             165079999999953778886089999999999998
Q gi|254780992|r  105 GKTSVTIYCDVWTCPRNASSDVLQKTCEATVVMVAV  140 (152)
Q Consensus       105 G~tSm~V~V~V~~~~~~~~~~~~~~v~~a~fTfVav  140 (152)
                      ||+...++++++.     .++  +++++|..||--+
T Consensus       109 Gr~~~~~e~~i~d-----~~g--~lvA~a~~T~~il  137 (138)
T d1vh9a_         109 GRQNQSWEIVVFD-----EQG--RRCCTCRLGTAVL  137 (138)
T ss_dssp             CSSEEEEEEEEEC-----TTS--CEEEEEEEEEEEC
T ss_pred             CCCEEEEEEEEEC-----CCC--CEEEEEEEEEEEE
T ss_conf             7889999999992-----899--8999996999998


SCOP domain information

class: Alpha and beta proteins (a+b)
fold: Thioesterase/thiol ester dehydrase-isomerase
superfamily: Thioesterase/thiol ester dehydrase-isomerase
family: PaaI/YdiI-like
domain: Hypothetical protein YbdB
species: Escherichia coli [TaxId: 562]